Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CWC22Q9HCG8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 pRNA.6-201ENST00000610482 90 ntBASIC26.06■■□□□ 1.76
CWC22Q9HCG8 pRNA.5-201ENST00000612139 90 ntBASIC26.06■■□□□ 1.76
CWC22Q9HCG8 pRNA.11-201ENST00000618423 90 ntBASIC26.06■■□□□ 1.76
CWC22Q9HCG8 pRNA.13-201ENST00000619112 90 ntBASIC26.06■■□□□ 1.76
CWC22Q9HCG8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CWC22Q9HCG8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CWC22Q9HCG8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CWC22Q9HCG8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.05■■□□□ 1.76
CWC22Q9HCG8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.05■■□□□ 1.76
CWC22Q9HCG8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
CWC22Q9HCG8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CWC22Q9HCG8 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CWC22Q9HCG8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 AL137060.1-201ENST00000618151 2648 ntBASIC26.04■■□□□ 1.76
CWC22Q9HCG8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CWC22Q9HCG8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 FBXW4P1-201ENST00000426721 2239 ntBASIC26.03■■□□□ 1.76
CWC22Q9HCG8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CWC22Q9HCG8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 AC034268.1-201ENST00000441047 882 ntBASIC26.02■■□□□ 1.76
CWC22Q9HCG8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CWC22Q9HCG8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CWC22Q9HCG8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26■■□□□ 1.75
CWC22Q9HCG8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26■■□□□ 1.75
CWC22Q9HCG8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CWC22Q9HCG8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CWC22Q9HCG8 TSPY26P-201ENST00000476365 1326 ntBASIC26■■□□□ 1.75
CWC22Q9HCG8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26■■□□□ 1.75
CWC22Q9HCG8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26■■□□□ 1.75
CWC22Q9HCG8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CWC22Q9HCG8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC26■■□□□ 1.75
CWC22Q9HCG8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26■■□□□ 1.75
CWC22Q9HCG8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CWC22Q9HCG8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CWC22Q9HCG8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms