Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 AL121603.2-201ENST00000557373 2117 ntBASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 MIR4767-201ENST00000582827 78 ntBASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLK4Q9HAZ1 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 BX842568.3-201ENST00000418104 571 ntBASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.91■□□□□ 0.94
CLK4Q9HAZ1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CLK4Q9HAZ1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.94
CLK4Q9HAZ1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLK4Q9HAZ1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLK4Q9HAZ1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLK4Q9HAZ1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLK4Q9HAZ1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 MIR638-201ENST00000385237 100 ntBASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 AC068587.7-201ENST00000641602 218 ntBASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLK4Q9HAZ1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 AC005837.3-201ENST00000612163 286 ntBASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.88■□□□□ 0.93
CLK4Q9HAZ1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 AC233992.3-201ENST00000607491 485 ntBASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.87■□□□□ 0.93
CLK4Q9HAZ1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLK4Q9HAZ1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms