Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.2■□□□□ 0.5
ALX4Q9H161 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALX4Q9H161 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.2■□□□□ 0.5
ALX4Q9H161 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.2■□□□□ 0.5
ALX4Q9H161 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALX4Q9H161 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ALX4Q9H161 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ALX4Q9H161 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALX4Q9H161 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.19■□□□□ 0.5
ALX4Q9H161 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALX4Q9H161 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALX4Q9H161 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.19■□□□□ 0.5
ALX4Q9H161 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALX4Q9H161 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALX4Q9H161 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALX4Q9H161 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ALX4Q9H161 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.18■□□□□ 0.5
ALX4Q9H161 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ALX4Q9H161 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.18■□□□□ 0.5
ALX4Q9H161 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.18■□□□□ 0.5
ALX4Q9H161 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALX4Q9H161 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ALX4Q9H161 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ALX4Q9H161 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 KRT18P24-201ENST00000344739 1156 ntBASIC18.17■□□□□ 0.5
ALX4Q9H161 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ALX4Q9H161 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ALX4Q9H161 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALX4Q9H161 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
ALX4Q9H161 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.17■□□□□ 0.5
ALX4Q9H161 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 LINC01006-201ENST00000333319 2292 ntBASIC18.16■□□□□ 0.5
ALX4Q9H161 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ALX4Q9H161 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ALX4Q9H161 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.16■□□□□ 0.5
ALX4Q9H161 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ALX4Q9H161 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
ALX4Q9H161 CA15P2-201ENST00000611168 834 ntBASIC18.16■□□□□ 0.5
ALX4Q9H161 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ALX4Q9H161 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ALX4Q9H161 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.16■□□□□ 0.5
ALX4Q9H161 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.16■□□□□ 0.5
ALX4Q9H161 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ALX4Q9H161 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALX4Q9H161 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
ALX4Q9H161 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ALX4Q9H161 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
ALX4Q9H161 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.16■□□□□ 0.5
ALX4Q9H161 AC007952.6-201ENST00000573168 2673 ntBASIC18.16■□□□□ 0.5
ALX4Q9H161 AC003957.1-201ENST00000625108 2673 ntBASIC18.16■□□□□ 0.5
ALX4Q9H161 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ALX4Q9H161 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.15■□□□□ 0.5
ALX4Q9H161 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.15■□□□□ 0.5
ALX4Q9H161 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ALX4Q9H161 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ALX4Q9H161 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ALX4Q9H161 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.15■□□□□ 0.5
ALX4Q9H161 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ALX4Q9H161 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ALX4Q9H161 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ALX4Q9H161 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.15■□□□□ 0.5
ALX4Q9H161 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
ALX4Q9H161 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
ALX4Q9H161 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms