Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 VN1R31P-201ENST00000417498 730 ntBASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 Z84478.1-201ENST00000438230 1219 ntBASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 ZNRF2P1-201ENST00000441407 443 ntBASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 AC005154.1-216ENST00000582145 1101 ntTSL 5 BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 Z94722.1-201ENST00000604328 474 ntBASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 AC239803.2-201ENST00000610161 430 ntBASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 AC004808.1-201ENST00000627671 721 ntBASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
KRTAP3-3Q9BYR6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
KRTAP3-3Q9BYR6 ZNF684-202ENST00000372697 1028 ntTSL 3 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 GTF3AP1-201ENST00000416942 1004 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 TMPRSS11GP-201ENST00000431070 1204 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AC106868.1-201ENST00000505272 992 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 MTCO3P42-201ENST00000509488 518 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 MTCYBP37-201ENST00000510642 1133 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 MTCO3P39-201ENST00000514812 518 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AP002761.2-201ENST00000541254 618 ntTSL 3 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AC016957.2-201ENST00000616998 848 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AC022400.7-201ENST00000625041 1236 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 AC092192.1-201ENST00000633154 1018 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 OR4G3P-201ENST00000633500 913 ntBASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
KRTAP3-3Q9BYR6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 TM2D3-202ENST00000347970 1329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 IL25-202ENST00000397242 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC092648.1-201ENST00000425870 423 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC007386.1-201ENST00000455212 582 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 ADI1P3-201ENST00000549509 470 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 GTF2IP6-201ENST00000583143 541 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AL118558.3-201ENST00000607414 1079 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 GAPDHP41-201ENST00000613707 975 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 AC105227.2-201ENST00000615075 605 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 TRIM64FP-201ENST00000427305 1371 ntBASIC13.19□□□□□ -0.3
KRTAP3-3Q9BYR6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 CSRP3-202ENST00000533783 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AL157902.2-201ENST00000623435 1492 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 RN7SKP230-201ENST00000365642 335 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 NPM1P23-201ENST00000440193 849 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 ZNF886P-201ENST00000450781 723 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC027338.1-201ENST00000514840 825 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC134407.1-201ENST00000577385 709 ntTSL 3 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC107982.3-201ENST00000584957 985 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC008764.7-201ENST00000593779 1081 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC095055.1-201ENST00000603472 1113 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 NDE1P2-201ENST00000605569 1105 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 AC006249.1-201ENST00000621223 471 ntBASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
KRTAP3-3Q9BYR6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
KRTAP3-3Q9BYR6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms