RNA–Protein interactions for RNA: ENST00000456062.1

AC004872.1-201, humanhuman

TSL 3 BASIC

Gene AC004872.1, Length 469 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004872.1-201ENST00000456062 AEBP2Q6ZN18 517 aaPredicted RBP29.78■■■□□ 2.36
AC004872.1-201ENST00000456062 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
AC004872.1-201ENST00000456062 SENP3Q9H4L4 574 aaPredicted RBP25.44■■□□□ 1.66
AC004872.1-201ENST00000456062 PHF23Q9BUL5 403 aaPredicted RBP25.06■■□□□ 1.6
AC004872.1-201ENST00000456062 FOXD1Q16676 465 aa23.7■■□□□ 1.38
AC004872.1-201ENST00000456062 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
AC004872.1-201ENST00000456062 MSH5O43196 834 aa22.25■■□□□ 1.15
AC004872.1-201ENST00000456062 PIAS4Q8N2W9 510 aaPredicted RBP22.09■■□□□ 1.13
AC004872.1-201ENST00000456062 PPP6R1Q9UPN7 881 aa22.07■■□□□ 1.12
AC004872.1-201ENST00000456062 ADRA2BP18089 450 aa21.96■■□□□ 1.11
AC004872.1-201ENST00000456062 POTEDQ86YR6 584 aa21.84■■□□□ 1.09
AC004872.1-201ENST00000456062 MAPK8IP2Q13387 824 aaPredicted RBP20.19■□□□□ 0.82
AC004872.1-201ENST00000456062 DMRT2Q9Y5R5 561 aa20.17■□□□□ 0.82
AC004872.1-201ENST00000456062 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
AC004872.1-201ENST00000456062 PPP4R3CPQ6ZMV5 832 aa19.68■□□□□ 0.74
AC004872.1-201ENST00000456062 HOXD11P31277 338 aaPredicted RBP19.42■□□□□ 0.7
AC004872.1-201ENST00000456062 CNKSR2Q8WXI2 1034 aa19.36■□□□□ 0.69
AC004872.1-201ENST00000456062 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
AC004872.1-201ENST00000456062 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
AC004872.1-201ENST00000456062 CACNB1Q02641 598 aaPredicted RBP19.07■□□□□ 0.64
AC004872.1-201ENST00000456062 RNF39Q9H2S5 420 aa18.97■□□□□ 0.63
AC004872.1-201ENST00000456062 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
AC004872.1-201ENST00000456062 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
AC004872.1-201ENST00000456062 C1QBPQ07021 282 aaKnown RBP18.7■□□□□ 0.58
AC004872.1-201ENST00000456062 NPM3O75607 178 aaKnown RBP18.63■□□□□ 0.57
AC004872.1-201ENST00000456062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.39■□□□□ 0.53
AC004872.1-201ENST00000456062 KCNA4P22459 653 aa18.16■□□□□ 0.5
AC004872.1-201ENST00000456062 U3KPZ7 1027 aaPredicted RBP18.05■□□□□ 0.48
AC004872.1-201ENST00000456062 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
AC004872.1-201ENST00000456062 SPINK5Q9NQ38 1064 aaPredicted RBP17.78■□□□□ 0.44
AC004872.1-201ENST00000456062 CAPN15O75808 1086 aa17.73■□□□□ 0.43
AC004872.1-201ENST00000456062 DSG3P32926 999 aa17.72■□□□□ 0.43
AC004872.1-201ENST00000456062 APLP2Q06481 763 aa17.56■□□□□ 0.4
AC004872.1-201ENST00000456062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.53■□□□□ 0.4
AC004872.1-201ENST00000456062 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
AC004872.1-201ENST00000456062 ZNF219Q9P2Y4 722 aaPredicted RBP17.46■□□□□ 0.39
AC004872.1-201ENST00000456062 SAMD1Q6SPF0 538 aaPredicted RBP17.42■□□□□ 0.38
AC004872.1-201ENST00000456062 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
AC004872.1-201ENST00000456062 ABCB7O75027 752 aa17.29■□□□□ 0.36
AC004872.1-201ENST00000456062 MYCNP04198 464 aaPredicted RBP17.25■□□□□ 0.35
AC004872.1-201ENST00000456062 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
AC004872.1-201ENST00000456062 POTEHQ6S545 545 aa17.09■□□□□ 0.33
AC004872.1-201ENST00000456062 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
AC004872.1-201ENST00000456062 POLA2Q14181 598 aa16.95■□□□□ 0.3
AC004872.1-201ENST00000456062 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
AC004872.1-201ENST00000456062 ATF5Q9Y2D1 282 aaPredicted RBP16.82■□□□□ 0.28
AC004872.1-201ENST00000456062 ZBTB22O15209 634 aa16.71■□□□□ 0.27
AC004872.1-201ENST00000456062 ZBTB12Q9Y330 459 aaPredicted RBP16.68■□□□□ 0.26
AC004872.1-201ENST00000456062 CHRDL2Q6WN34 429 aa16.56■□□□□ 0.24
AC004872.1-201ENST00000456062 ATXN8OSP0DMR3 200 aa16.55■□□□□ 0.24
AC004872.1-201ENST00000456062 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
AC004872.1-201ENST00000456062 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
AC004872.1-201ENST00000456062 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.2
AC004872.1-201ENST00000456062 FBLN2P98095 1184 aa16.18■□□□□ 0.18
AC004872.1-201ENST00000456062 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
AC004872.1-201ENST00000456062 PIP4P2Q8N4L2 257 aa16.15■□□□□ 0.18
AC004872.1-201ENST00000456062 SPDYE2BA6NHP3 402 aa16.14■□□□□ 0.17
AC004872.1-201ENST00000456062 SPDYE6P0CI01 402 aa16.14■□□□□ 0.17
AC004872.1-201ENST00000456062 SPDYE2Q495Y8 402 aa16.14■□□□□ 0.17
AC004872.1-201ENST00000456062 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
AC004872.1-201ENST00000456062 MKRN4PQ13434 485 aaPredicted RBP16.07■□□□□ 0.16
AC004872.1-201ENST00000456062 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
AC004872.1-201ENST00000456062 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
AC004872.1-201ENST00000456062 SPDYE1Q8NFV5 336 aaPredicted RBP15.87■□□□□ 0.13
AC004872.1-201ENST00000456062 ZNF692Q9BU19 519 aaPredicted RBP15.87■□□□□ 0.13
AC004872.1-201ENST00000456062 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
AC004872.1-201ENST00000456062 HAX1O00165 279 aa15.82■□□□□ 0.12
AC004872.1-201ENST00000456062 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
AC004872.1-201ENST00000456062 PRKAR2AP13861 404 aaKnown RBP15.71■□□□□ 0.11
AC004872.1-201ENST00000456062 EVX2Q03828 476 aa15.65■□□□□ 0.1
AC004872.1-201ENST00000456062 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
AC004872.1-201ENST00000456062 C19orf67A6NJJ6 358 aa15.56■□□□□ 0.08
AC004872.1-201ENST00000456062 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
AC004872.1-201ENST00000456062 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
AC004872.1-201ENST00000456062 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
AC004872.1-201ENST00000456062 GABBR2O75899 941 aa15.31■□□□□ 0.04
AC004872.1-201ENST00000456062 FARP1Q9Y4F1 1045 aaPredicted RBP15.3■□□□□ 0.04
AC004872.1-201ENST00000456062 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
AC004872.1-201ENST00000456062 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
AC004872.1-201ENST00000456062 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
AC004872.1-201ENST00000456062 CREBZFQ9NS37 354 aa15.16■□□□□ 0.02
AC004872.1-201ENST00000456062 CLCN6P51797 869 aa15.14■□□□□ 0.01
AC004872.1-201ENST00000456062 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
AC004872.1-201ENST00000456062 POTEIP0CG38 1075 aa15□□□□□ -0.01
AC004872.1-201ENST00000456062 LHX8Q68G74 356 aa14.97□□□□□ -0.01
AC004872.1-201ENST00000456062 PROM2Q8N271 834 aa14.97□□□□□ -0.01
AC004872.1-201ENST00000456062 ZRANB1Q9UGI0 708 aa14.97□□□□□ -0.01
AC004872.1-201ENST00000456062 MNX1P50219 401 aaPredicted RBP14.92□□□□□ -0.02
AC004872.1-201ENST00000456062 NPM1P06748 294 aaKnown RBP eCLIP14.87□□□□□ -0.03
AC004872.1-201ENST00000456062 DCBLD2Q96PD2 775 aa14.85□□□□□ -0.03
AC004872.1-201ENST00000456062 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
AC004872.1-201ENST00000456062 GALR2O43603 387 aaPredicted RBP14.8□□□□□ -0.04
AC004872.1-201ENST00000456062 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
AC004872.1-201ENST00000456062 MS4A3Q96HJ5 214 aa14.57□□□□□ -0.08
AC004872.1-201ENST00000456062 CCDC61Q9Y6R9 512 aa14.57□□□□□ -0.08
AC004872.1-201ENST00000456062 ASTLQ6HA08 431 aaPredicted RBP14.55□□□□□ -0.08
AC004872.1-201ENST00000456062 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
AC004872.1-201ENST00000456062 PELP1Q8IZL8 1130 aaKnown RBP14.53□□□□□ -0.08
AC004872.1-201ENST00000456062 TSPYL2Q9H2G4 693 aaPredicted RBP14.53□□□□□ -0.08
AC004872.1-201ENST00000456062 MIER1Q8N108 512 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms