RNA–Protein interactions for RNA: ENST00000514840.1

AC027338.1-201, humanhuman

BASIC

Gene AC027338.1, Length 825 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027338.1-201ENST00000514840 AEBP2Q6ZN18 517 aaPredicted RBP29.86■■■□□ 2.37
AC027338.1-201ENST00000514840 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
AC027338.1-201ENST00000514840 SENP3Q9H4L4 574 aaPredicted RBP25.46■■□□□ 1.67
AC027338.1-201ENST00000514840 PHF23Q9BUL5 403 aaPredicted RBP25.16■■□□□ 1.62
AC027338.1-201ENST00000514840 FOXD1Q16676 465 aa23.72■■□□□ 1.39
AC027338.1-201ENST00000514840 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
AC027338.1-201ENST00000514840 PPP6R1Q9UPN7 881 aa22.28■■□□□ 1.16
AC027338.1-201ENST00000514840 ADRA2BP18089 450 aa22.25■■□□□ 1.15
AC027338.1-201ENST00000514840 PIAS4Q8N2W9 510 aaPredicted RBP22.22■■□□□ 1.15
AC027338.1-201ENST00000514840 MSH5O43196 834 aa22.13■■□□□ 1.13
AC027338.1-201ENST00000514840 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
AC027338.1-201ENST00000514840 MAPK8IP2Q13387 824 aaPredicted RBP20.4■□□□□ 0.86
AC027338.1-201ENST00000514840 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
AC027338.1-201ENST00000514840 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
AC027338.1-201ENST00000514840 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
AC027338.1-201ENST00000514840 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
AC027338.1-201ENST00000514840 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
AC027338.1-201ENST00000514840 DCAF8L1A6NGE4 600 aa19.46■□□□□ 0.71
AC027338.1-201ENST00000514840 RNF216Q9NWF9 866 aaPredicted RBP19.39■□□□□ 0.69
AC027338.1-201ENST00000514840 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
AC027338.1-201ENST00000514840 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
AC027338.1-201ENST00000514840 CACNB1Q02641 598 aaPredicted RBP18.96■□□□□ 0.63
AC027338.1-201ENST00000514840 KCNA4P22459 653 aa18.93■□□□□ 0.62
AC027338.1-201ENST00000514840 RNF39Q9H2S5 420 aa18.89■□□□□ 0.61
AC027338.1-201ENST00000514840 DNAJC5BQ9UF47 199 aa18.75■□□□□ 0.59
AC027338.1-201ENST00000514840 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.58
AC027338.1-201ENST00000514840 C1QBPQ07021 282 aaKnown RBP18.63■□□□□ 0.57
AC027338.1-201ENST00000514840 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
AC027338.1-201ENST00000514840 SLC4A2P04920 1241 aa18.12■□□□□ 0.49
AC027338.1-201ENST00000514840 SLC4A1APQ9BWU0 796 aaKnown RBP18.04■□□□□ 0.48
AC027338.1-201ENST00000514840 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
AC027338.1-201ENST00000514840 CAPN15O75808 1086 aa17.93■□□□□ 0.46
AC027338.1-201ENST00000514840 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
AC027338.1-201ENST00000514840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
AC027338.1-201ENST00000514840 DSG3P32926 999 aa17.75■□□□□ 0.43
AC027338.1-201ENST00000514840 HNRNPUL2Q1KMD3 747 aaKnown RBP17.75■□□□□ 0.43
AC027338.1-201ENST00000514840 APLP2Q06481 763 aa17.73■□□□□ 0.43
AC027338.1-201ENST00000514840 TRHP20396 242 aaPredicted RBP17.69■□□□□ 0.42
AC027338.1-201ENST00000514840 SAMD1Q6SPF0 538 aaPredicted RBP17.66■□□□□ 0.42
AC027338.1-201ENST00000514840 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
AC027338.1-201ENST00000514840 MYCNP04198 464 aaPredicted RBP17.58■□□□□ 0.4
AC027338.1-201ENST00000514840 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
AC027338.1-201ENST00000514840 ABCB7O75027 752 aa17.53■□□□□ 0.4
AC027338.1-201ENST00000514840 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
AC027338.1-201ENST00000514840 ZBTB22O15209 634 aa17.45■□□□□ 0.38
AC027338.1-201ENST00000514840 POLA2Q14181 598 aa17.23■□□□□ 0.35
AC027338.1-201ENST00000514840 ATF5Q9Y2D1 282 aaPredicted RBP17.18■□□□□ 0.34
AC027338.1-201ENST00000514840 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
AC027338.1-201ENST00000514840 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
AC027338.1-201ENST00000514840 ZBTB12Q9Y330 459 aaPredicted RBP16.84■□□□□ 0.29
AC027338.1-201ENST00000514840 POTEHQ6S545 545 aa16.79■□□□□ 0.28
AC027338.1-201ENST00000514840 OSCARQ8IYS5 282 aa16.65■□□□□ 0.26
AC027338.1-201ENST00000514840 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
AC027338.1-201ENST00000514840 CHRDL2Q6WN34 429 aa16.53■□□□□ 0.24
AC027338.1-201ENST00000514840 FBLN2P98095 1184 aa16.52■□□□□ 0.24
AC027338.1-201ENST00000514840 REM2Q8IYK8 340 aaPredicted RBP16.43■□□□□ 0.22
AC027338.1-201ENST00000514840 MKRN4PQ13434 485 aaPredicted RBP16.38■□□□□ 0.21
AC027338.1-201ENST00000514840 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
AC027338.1-201ENST00000514840 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
AC027338.1-201ENST00000514840 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
AC027338.1-201ENST00000514840 PITPNM1O00562 1244 aa16.25■□□□□ 0.19
AC027338.1-201ENST00000514840 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
AC027338.1-201ENST00000514840 PIP4P2Q8N4L2 257 aa16.16■□□□□ 0.18
AC027338.1-201ENST00000514840 SSUH2Q9Y2M2 353 aa16.11■□□□□ 0.17
AC027338.1-201ENST00000514840 FXR2P51116 673 aaKnown RBP eCLIP16.06■□□□□ 0.16
AC027338.1-201ENST00000514840 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
AC027338.1-201ENST00000514840 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
AC027338.1-201ENST00000514840 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
AC027338.1-201ENST00000514840 HAX1O00165 279 aa15.88■□□□□ 0.13
AC027338.1-201ENST00000514840 PRKAR2AP13861 404 aaKnown RBP15.85■□□□□ 0.13
AC027338.1-201ENST00000514840 FKBP8Q14318 412 aa15.84■□□□□ 0.13
AC027338.1-201ENST00000514840 SP7Q8TDD2 431 aaPredicted RBP15.81■□□□□ 0.12
AC027338.1-201ENST00000514840 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
AC027338.1-201ENST00000514840 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
AC027338.1-201ENST00000514840 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
AC027338.1-201ENST00000514840 EVX2Q03828 476 aa15.66■□□□□ 0.1
AC027338.1-201ENST00000514840 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
AC027338.1-201ENST00000514840 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
AC027338.1-201ENST00000514840 FARP1Q9Y4F1 1045 aaPredicted RBP15.47■□□□□ 0.07
AC027338.1-201ENST00000514840 CREBZFQ9NS37 354 aa15.39■□□□□ 0.05
AC027338.1-201ENST00000514840 CD44P16070 742 aaKnown RBP15.36■□□□□ 0.05
AC027338.1-201ENST00000514840 GABBR2O75899 941 aa15.31■□□□□ 0.04
AC027338.1-201ENST00000514840 PROM2Q8N271 834 aa15.31■□□□□ 0.04
AC027338.1-201ENST00000514840 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
AC027338.1-201ENST00000514840 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
AC027338.1-201ENST00000514840 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
AC027338.1-201ENST00000514840 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
AC027338.1-201ENST00000514840 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
AC027338.1-201ENST00000514840 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
AC027338.1-201ENST00000514840 CLCN6P51797 869 aa15.07■□□□□ 0
AC027338.1-201ENST00000514840 MIER1Q8N108 512 aa15□□□□□ -0.01
AC027338.1-201ENST00000514840 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
AC027338.1-201ENST00000514840 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
AC027338.1-201ENST00000514840 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
AC027338.1-201ENST00000514840 VASPP50552 380 aaPredicted RBP14.96□□□□□ -0.01
AC027338.1-201ENST00000514840 DCBLD2Q96PD2 775 aa14.96□□□□□ -0.01
AC027338.1-201ENST00000514840 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
AC027338.1-201ENST00000514840 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
AC027338.1-201ENST00000514840 PLCD3Q8N3E9 789 aa14.9□□□□□ -0.02
AC027338.1-201ENST00000514840 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms