Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
RTFDC1Q9BY42 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.51■■□□□ 1.83
RTFDC1Q9BY42 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 AC133041.1-202ENST00000642053 222 ntBASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTFDC1Q9BY42 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 AF201337.1-201ENST00000520239 748 ntBASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 KRT18P20-201ENST00000548986 1279 ntBASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RTFDC1Q9BY42 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 AC010141.2-201ENST00000452426 721 ntBASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTFDC1Q9BY42 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 DUSP8P5-201ENST00000422884 1815 ntBASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 AC138907.5-202ENST00000569484 235 ntBASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 AC010536.3-201ENST00000620306 533 ntBASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTFDC1Q9BY42 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTFDC1Q9BY42 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
RTFDC1Q9BY42 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTFDC1Q9BY42 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTFDC1Q9BY42 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.45■■□□□ 1.82
RTFDC1Q9BY42 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 AC098934.4-201ENST00000564127 592 ntBASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 AC105036.2-201ENST00000569468 176 ntBASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
RTFDC1Q9BY42 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
RTFDC1Q9BY42 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
RTFDC1Q9BY42 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.43■■□□□ 1.82
RTFDC1Q9BY42 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RTFDC1Q9BY42 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.43■■□□□ 1.82
RTFDC1Q9BY42 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
RTFDC1Q9BY42 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms