Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LITAFQ99732 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.42□□□□□ -0.1
LITAFQ99732 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.41□□□□□ -0.1
LITAFQ99732 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LITAFQ99732 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.41□□□□□ -0.1
LITAFQ99732 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.41□□□□□ -0.1
LITAFQ99732 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LITAFQ99732 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LITAFQ99732 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.41□□□□□ -0.1
LITAFQ99732 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 GABARAPL3-202ENST00000624044 1851 ntBASIC14.41□□□□□ -0.1
LITAFQ99732 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.41□□□□□ -0.1
LITAFQ99732 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.41□□□□□ -0.1
LITAFQ99732 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LITAFQ99732 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.41□□□□□ -0.1
LITAFQ99732 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LITAFQ99732 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LITAFQ99732 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LITAFQ99732 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LITAFQ99732 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.4□□□□□ -0.1
LITAFQ99732 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LITAFQ99732 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.4□□□□□ -0.1
LITAFQ99732 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.4□□□□□ -0.1
LITAFQ99732 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 MLEC-202ENST00000412616 841 ntTSL 3 BASIC14.4□□□□□ -0.1
LITAFQ99732 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.4□□□□□ -0.1
LITAFQ99732 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 AC016575.1-201ENST00000607026 382 ntBASIC14.4□□□□□ -0.1
LITAFQ99732 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LITAFQ99732 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
LITAFQ99732 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LITAFQ99732 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
LITAFQ99732 AFG3L1P-217ENST00000557444 2447 ntBASIC14.4□□□□□ -0.1
LITAFQ99732 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
LITAFQ99732 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
LITAFQ99732 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
LITAFQ99732 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.11
LITAFQ99732 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.39□□□□□ -0.11
LITAFQ99732 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.39□□□□□ -0.11
LITAFQ99732 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.39□□□□□ -0.11
LITAFQ99732 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.39□□□□□ -0.11
LITAFQ99732 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LITAFQ99732 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.39□□□□□ -0.11
LITAFQ99732 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LITAFQ99732 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 OXCT2P1-201ENST00000447263 1535 ntBASIC14.39□□□□□ -0.11
LITAFQ99732 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.39□□□□□ -0.11
LITAFQ99732 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LITAFQ99732 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.39□□□□□ -0.11
LITAFQ99732 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LITAFQ99732 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC14.39□□□□□ -0.11
LITAFQ99732 AC009831.1-201ENST00000580420 1582 ntBASIC14.39□□□□□ -0.11
LITAFQ99732 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LITAFQ99732 AP005212.1-201ENST00000581547 1997 ntBASIC14.38□□□□□ -0.11
LITAFQ99732 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LITAFQ99732 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LITAFQ99732 TPT1-202ENST00000379055 948 ntTSL 2 BASIC14.38□□□□□ -0.11
LITAFQ99732 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LITAFQ99732 AC022413.1-201ENST00000624602 984 ntBASIC14.38□□□□□ -0.11
LITAFQ99732 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.38□□□□□ -0.11
LITAFQ99732 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LITAFQ99732 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LITAFQ99732 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LITAFQ99732 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LITAFQ99732 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.38□□□□□ -0.11
LITAFQ99732 LINC01529-204ENST00000636474 1715 ntBASIC14.38□□□□□ -0.11
LITAFQ99732 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
LITAFQ99732 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
LITAFQ99732 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LITAFQ99732 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LITAFQ99732 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms