Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.26■■□□□ 1.31
CASD1Q96PB1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.26■■□□□ 1.31
CASD1Q96PB1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.26■■□□□ 1.31
CASD1Q96PB1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.26■■□□□ 1.31
CASD1Q96PB1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CASD1Q96PB1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.25■■□□□ 1.31
CASD1Q96PB1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
CASD1Q96PB1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.25■■□□□ 1.31
CASD1Q96PB1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.25■■□□□ 1.31
CASD1Q96PB1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
CASD1Q96PB1 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.25■■□□□ 1.31
CASD1Q96PB1 AC231657.2-201ENST00000624556 255 ntBASIC23.25■■□□□ 1.31
CASD1Q96PB1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CASD1Q96PB1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CASD1Q96PB1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASD1Q96PB1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CASD1Q96PB1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CASD1Q96PB1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.24■■□□□ 1.31
CASD1Q96PB1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.24■■□□□ 1.31
CASD1Q96PB1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.24■■□□□ 1.31
CASD1Q96PB1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.24■■□□□ 1.31
CASD1Q96PB1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.24■■□□□ 1.31
CASD1Q96PB1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.24■■□□□ 1.31
CASD1Q96PB1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CASD1Q96PB1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.24■■□□□ 1.31
CASD1Q96PB1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CASD1Q96PB1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CASD1Q96PB1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CASD1Q96PB1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CASD1Q96PB1 AP004607.7-201ENST00000527152 1677 ntBASIC23.23■■□□□ 1.31
CASD1Q96PB1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
CASD1Q96PB1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.23■■□□□ 1.31
CASD1Q96PB1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CASD1Q96PB1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.23■■□□□ 1.31
CASD1Q96PB1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.23■■□□□ 1.31
CASD1Q96PB1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CASD1Q96PB1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CASD1Q96PB1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CASD1Q96PB1 MYCNOS-205ENST00000641950 531 ntBASIC23.23■■□□□ 1.31
CASD1Q96PB1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CASD1Q96PB1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CASD1Q96PB1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CASD1Q96PB1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 AC083906.2-201ENST00000511578 360 ntBASIC23.22■■□□□ 1.31
CASD1Q96PB1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 AL121832.2-201ENST00000610979 668 ntBASIC23.22■■□□□ 1.31
CASD1Q96PB1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CASD1Q96PB1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASD1Q96PB1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASD1Q96PB1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASD1Q96PB1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CASD1Q96PB1 AC007322.1-201ENST00000426983 750 ntBASIC23.21■■□□□ 1.31
CASD1Q96PB1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.21■■□□□ 1.31
CASD1Q96PB1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.21■■□□□ 1.31
CASD1Q96PB1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.21■■□□□ 1.31
CASD1Q96PB1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.21■■□□□ 1.31
CASD1Q96PB1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASD1Q96PB1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.21■■□□□ 1.31
CASD1Q96PB1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASD1Q96PB1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CASD1Q96PB1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CASD1Q96PB1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CASD1Q96PB1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASD1Q96PB1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASD1Q96PB1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASD1Q96PB1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CASD1Q96PB1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASD1Q96PB1 AC142086.2-201ENST00000569753 217 ntBASIC23.2■■□□□ 1.3
CASD1Q96PB1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CASD1Q96PB1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASD1Q96PB1 AC005181.1-201ENST00000604782 1256 ntBASIC23.2■■□□□ 1.3
CASD1Q96PB1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.2■■□□□ 1.3
CASD1Q96PB1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.2■■□□□ 1.3
CASD1Q96PB1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CASD1Q96PB1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CASD1Q96PB1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.19■■□□□ 1.3
CASD1Q96PB1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.19■■□□□ 1.3
CASD1Q96PB1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CASD1Q96PB1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.19■■□□□ 1.3
CASD1Q96PB1 LINC00526-201ENST00000581067 1875 ntBASIC23.19■■□□□ 1.3
CASD1Q96PB1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CASD1Q96PB1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.19■■□□□ 1.3
CASD1Q96PB1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.18■■□□□ 1.3
CASD1Q96PB1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASD1Q96PB1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
CASD1Q96PB1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CASD1Q96PB1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms