Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NECTIN4Q96NY8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 DUSP8P3-201ENST00000399571 1760 ntBASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.54■■□□□ 1.2
NECTIN4Q96NY8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 AC055733.4-201ENST00000638462 1354 ntBASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 AC098934.4-201ENST00000564127 592 ntBASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NECTIN4Q96NY8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NECTIN4Q96NY8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 RNA5SP413-201ENST00000516373 109 ntBASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 SLC7A5P1-201ENST00000568957 537 ntBASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NECTIN4Q96NY8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NECTIN4Q96NY8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NECTIN4Q96NY8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 MKRN4P-201ENST00000444706 1521 ntBASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 MIPEPP3-201ENST00000412105 444 ntBASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 PPP1R14BP2-201ENST00000426284 444 ntBASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 TERF1P5-201ENST00000477545 1207 ntBASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
NECTIN4Q96NY8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 OR10C1-204ENST00000622521 1039 ntBASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NECTIN4Q96NY8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms