Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.58■■□□□ 1.37
LRCH3Q96II8 UNC93B5-201ENST00000530315 699 ntBASIC23.58■■□□□ 1.37
LRCH3Q96II8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.58■■□□□ 1.37
LRCH3Q96II8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
LRCH3Q96II8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.57■■□□□ 1.36
LRCH3Q96II8 CYP2T1P-201ENST00000432607 1285 ntBASIC23.57■■□□□ 1.36
LRCH3Q96II8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.57■■□□□ 1.36
LRCH3Q96II8 AL359736.2-201ENST00000621992 437 ntBASIC23.57■■□□□ 1.36
LRCH3Q96II8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.57■■□□□ 1.36
LRCH3Q96II8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRCH3Q96II8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LRCH3Q96II8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
LRCH3Q96II8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LRCH3Q96II8 FP325331.1-202ENST00000623531 1380 ntBASIC23.56■■□□□ 1.36
LRCH3Q96II8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
LRCH3Q96II8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRCH3Q96II8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.56■■□□□ 1.36
LRCH3Q96II8 AC093787.1-201ENST00000450396 207 ntBASIC23.56■■□□□ 1.36
LRCH3Q96II8 AC097658.1-201ENST00000475555 843 ntBASIC23.56■■□□□ 1.36
LRCH3Q96II8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LRCH3Q96II8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LRCH3Q96II8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRCH3Q96II8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRCH3Q96II8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRCH3Q96II8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
LRCH3Q96II8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRCH3Q96II8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
LRCH3Q96II8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.55■■□□□ 1.36
LRCH3Q96II8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
LRCH3Q96II8 BX276092.2-201ENST00000417668 665 ntBASIC23.54■■□□□ 1.36
LRCH3Q96II8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 SNORA78-201ENST00000459373 127 ntBASIC23.54■■□□□ 1.36
LRCH3Q96II8 AC026366.1-201ENST00000488803 879 ntBASIC23.54■■□□□ 1.36
LRCH3Q96II8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.54■■□□□ 1.36
LRCH3Q96II8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.54■■□□□ 1.36
LRCH3Q96II8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.54■■□□□ 1.36
LRCH3Q96II8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.54■■□□□ 1.36
LRCH3Q96II8 MIR6089-201ENST00000616698 64 ntBASIC23.54■■□□□ 1.36
LRCH3Q96II8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
LRCH3Q96II8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.54■■□□□ 1.36
LRCH3Q96II8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
LRCH3Q96II8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
LRCH3Q96II8 AC068338.2-201ENST00000563278 1430 ntBASIC23.53■■□□□ 1.36
LRCH3Q96II8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.53■■□□□ 1.36
LRCH3Q96II8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.53■■□□□ 1.36
LRCH3Q96II8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
LRCH3Q96II8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
LRCH3Q96II8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LRCH3Q96II8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.52■■□□□ 1.36
LRCH3Q96II8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRCH3Q96II8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.52■■□□□ 1.36
LRCH3Q96II8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRCH3Q96II8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LRCH3Q96II8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.52■■□□□ 1.36
LRCH3Q96II8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
LRCH3Q96II8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.51■■□□□ 1.35
LRCH3Q96II8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRCH3Q96II8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRCH3Q96II8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.51■■□□□ 1.35
LRCH3Q96II8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRCH3Q96II8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.51■■□□□ 1.35
LRCH3Q96II8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRCH3Q96II8 AL445228.2-201ENST00000605589 952 ntBASIC23.51■■□□□ 1.35
LRCH3Q96II8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRCH3Q96II8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LRCH3Q96II8 SLC6A10P-202ENST00000431994 2058 ntBASIC23.51■■□□□ 1.35
LRCH3Q96II8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LRCH3Q96II8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LRCH3Q96II8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms