Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 DUX4L4-201ENST00000566884 1269 ntBASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 AC010997.5-201ENST00000609182 354 ntBASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.32■□□□□ 0.84
SLC47A1Q96FL8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC47A1Q96FL8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 TSPY9P-201ENST00000440215 945 ntBASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 TSPY11P-201ENST00000442607 1045 ntBASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 CA15P2-201ENST00000611168 834 ntBASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 AC004687.1-201ENST00000579003 1625 ntBASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC47A1Q96FL8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.29■□□□□ 0.84
SLC47A1Q96FL8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 Z98882.1-201ENST00000622160 2253 ntBASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 AC073130.3-201ENST00000624389 2278 ntBASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC47A1Q96FL8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
SLC47A1Q96FL8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.27■□□□□ 0.83
SLC47A1Q96FL8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
SLC47A1Q96FL8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC47A1Q96FL8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms