Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 AC079834.2-201ENST00000609776 1949 ntBASIC21.32■■□□□ 1
SH3KBP1Q96B97 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.32■■□□□ 1
SH3KBP1Q96B97 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SH3KBP1Q96B97 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.31■■□□□ 1
SH3KBP1Q96B97 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
SH3KBP1Q96B97 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SH3KBP1Q96B97 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.31■■□□□ 1
SH3KBP1Q96B97 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SH3KBP1Q96B97 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SH3KBP1Q96B97 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.31■■□□□ 1
SH3KBP1Q96B97 AL162430.1-201ENST00000480705 870 ntBASIC21.31■■□□□ 1
SH3KBP1Q96B97 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.31■■□□□ 1
SH3KBP1Q96B97 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.31■■□□□ 1
SH3KBP1Q96B97 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.31■■□□□ 1
SH3KBP1Q96B97 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.3■■□□□ 1
SH3KBP1Q96B97 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.3■■□□□ 1
SH3KBP1Q96B97 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 AC010141.3-201ENST00000456659 717 ntBASIC21.3■■□□□ 1
SH3KBP1Q96B97 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.3■■□□□ 1
SH3KBP1Q96B97 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
SH3KBP1Q96B97 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.3■■□□□ 1
SH3KBP1Q96B97 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.3■■□□□ 1
SH3KBP1Q96B97 MIR6084-201ENST00000622012 110 ntBASIC21.3■■□□□ 1
SH3KBP1Q96B97 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3KBP1Q96B97 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3KBP1Q96B97 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3KBP1Q96B97 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3KBP1Q96B97 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3KBP1Q96B97 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3KBP1Q96B97 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 AL031602.1-201ENST00000633169 911 ntBASIC21.29■■□□□ 1
SH3KBP1Q96B97 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3KBP1Q96B97 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 AL117328.2-201ENST00000624617 1940 ntBASIC21.29■■□□□ 1
SH3KBP1Q96B97 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.29■■□□□ 1
SH3KBP1Q96B97 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3KBP1Q96B97 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.28■■□□□ 1
SH3KBP1Q96B97 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SH3KBP1Q96B97 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.28■■□□□ 1
SH3KBP1Q96B97 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SH3KBP1Q96B97 LINC02228-203ENST00000641970 1355 ntBASIC21.28■■□□□ 1
SH3KBP1Q96B97 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.28■■□□□ 1
SH3KBP1Q96B97 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.28■■□□□ 1
SH3KBP1Q96B97 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.28■■□□□ 1
SH3KBP1Q96B97 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3KBP1Q96B97 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3KBP1Q96B97 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3KBP1Q96B97 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3KBP1Q96B97 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3KBP1Q96B97 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SH3KBP1Q96B97 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SH3KBP1Q96B97 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.27■■□□□ 1
SH3KBP1Q96B97 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.27■■□□□ 1
SH3KBP1Q96B97 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.27■■□□□ 1
SH3KBP1Q96B97 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.27■■□□□ 1
SH3KBP1Q96B97 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.27■□□□□ 0.99
SH3KBP1Q96B97 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.27■□□□□ 0.99
SH3KBP1Q96B97 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3KBP1Q96B97 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms