Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBE2E3Q969T4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 EDA-201ENST00000338901 1233 ntBASIC20.78■□□□□ 0.92
UBE2E3Q969T4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.78■□□□□ 0.92
UBE2E3Q969T4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 AC126544.1-201ENST00000580842 1059 ntBASIC20.77■□□□□ 0.92
UBE2E3Q969T4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
UBE2E3Q969T4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.77■□□□□ 0.91
UBE2E3Q969T4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.77■□□□□ 0.91
UBE2E3Q969T4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBE2E3Q969T4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 AC027682.1-201ENST00000562846 899 ntBASIC20.75■□□□□ 0.91
UBE2E3Q969T4 AL034346.1-201ENST00000568244 1277 ntBASIC20.75■□□□□ 0.91
UBE2E3Q969T4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBE2E3Q969T4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.74■□□□□ 0.91
UBE2E3Q969T4 AC110285.6-201ENST00000617652 491 ntBASIC20.74■□□□□ 0.91
UBE2E3Q969T4 AL355001.2-201ENST00000620617 1191 ntBASIC20.74■□□□□ 0.91
UBE2E3Q969T4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBE2E3Q969T4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 AC008764.7-201ENST00000593779 1081 ntBASIC20.73■□□□□ 0.91
UBE2E3Q969T4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
UBE2E3Q969T4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBE2E3Q969T4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms