Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
STAG1Q8WVM7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
STAG1Q8WVM7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
STAG1Q8WVM7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
STAG1Q8WVM7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
STAG1Q8WVM7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 AC123595.1-201ENST00000440769 1046 ntBASIC25.54■■□□□ 1.68
STAG1Q8WVM7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
STAG1Q8WVM7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 AC242852.2-201ENST00000615738 1807 ntBASIC25.53■■□□□ 1.68
STAG1Q8WVM7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
STAG1Q8WVM7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 AC034268.1-201ENST00000441047 882 ntBASIC25.52■■□□□ 1.68
STAG1Q8WVM7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.52■■□□□ 1.68
STAG1Q8WVM7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
STAG1Q8WVM7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
STAG1Q8WVM7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG1Q8WVM7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG1Q8WVM7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG1Q8WVM7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
STAG1Q8WVM7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
STAG1Q8WVM7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.5■■□□□ 1.67
STAG1Q8WVM7 AP004607.7-201ENST00000527152 1677 ntBASIC25.5■■□□□ 1.67
STAG1Q8WVM7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
STAG1Q8WVM7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.49■■□□□ 1.67
STAG1Q8WVM7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.48■■□□□ 1.67
STAG1Q8WVM7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms