Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCHCR1Q8TD31 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.44■■□□□ 1.18
CCHCR1Q8TD31 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 AL137060.1-201ENST00000618151 2648 ntBASIC22.43■■□□□ 1.18
CCHCR1Q8TD31 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCHCR1Q8TD31 FAM99A-202ENST00000538190 1989 ntBASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCHCR1Q8TD31 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 AC099791.2-201ENST00000605725 427 ntBASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCHCR1Q8TD31 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
CCHCR1Q8TD31 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.39■■□□□ 1.18
CCHCR1Q8TD31 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 DUX4L19-201ENST00000557448 1267 ntBASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
CCHCR1Q8TD31 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CCHCR1Q8TD31 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 AC244015.2-201ENST00000616358 1861 ntBASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 AC026310.3-201ENST00000625186 2373 ntBASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.37■■□□□ 1.17
CCHCR1Q8TD31 AL499627.2-201ENST00000606283 725 ntBASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms