Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.92■□□□□ 0.78
CHD6Q8TD26 AC096887.2-201ENST00000623443 1957 ntBASIC19.92■□□□□ 0.78
CHD6Q8TD26 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.92■□□□□ 0.78
CHD6Q8TD26 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD6Q8TD26 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD6Q8TD26 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CHD6Q8TD26 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CHD6Q8TD26 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD6Q8TD26 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHD6Q8TD26 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.91■□□□□ 0.78
CHD6Q8TD26 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD6Q8TD26 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD6Q8TD26 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD6Q8TD26 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD6Q8TD26 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD6Q8TD26 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD6Q8TD26 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD6Q8TD26 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHD6Q8TD26 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHD6Q8TD26 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD6Q8TD26 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD6Q8TD26 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.9■□□□□ 0.78
CHD6Q8TD26 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD6Q8TD26 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD6Q8TD26 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD6Q8TD26 AP001412.1-201ENST00000608405 714 ntBASIC19.9■□□□□ 0.78
CHD6Q8TD26 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD6Q8TD26 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD6Q8TD26 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.89■□□□□ 0.78
CHD6Q8TD26 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.89■□□□□ 0.78
CHD6Q8TD26 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CHD6Q8TD26 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD6Q8TD26 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD6Q8TD26 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD6Q8TD26 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.89■□□□□ 0.77
CHD6Q8TD26 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD6Q8TD26 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD6Q8TD26 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.89■□□□□ 0.77
CHD6Q8TD26 AL135905.2-201ENST00000584934 1404 ntBASIC19.89■□□□□ 0.77
CHD6Q8TD26 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.89■□□□□ 0.77
CHD6Q8TD26 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD6Q8TD26 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD6Q8TD26 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.89■□□□□ 0.77
CHD6Q8TD26 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD6Q8TD26 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD6Q8TD26 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.87■□□□□ 0.77
CHD6Q8TD26 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHD6Q8TD26 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD6Q8TD26 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.87■□□□□ 0.77
CHD6Q8TD26 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHD6Q8TD26 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.87■□□□□ 0.77
CHD6Q8TD26 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHD6Q8TD26 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD6Q8TD26 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHD6Q8TD26 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD6Q8TD26 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHD6Q8TD26 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.86■□□□□ 0.77
CHD6Q8TD26 DUSP5P1-201ENST00000441325 1139 ntBASIC19.85■□□□□ 0.77
CHD6Q8TD26 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD6Q8TD26 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD6Q8TD26 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD6Q8TD26 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.85■□□□□ 0.77
CHD6Q8TD26 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHD6Q8TD26 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHD6Q8TD26 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.85■□□□□ 0.77
CHD6Q8TD26 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHD6Q8TD26 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHD6Q8TD26 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHD6Q8TD26 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.84■□□□□ 0.77
CHD6Q8TD26 TERF1P5-201ENST00000477545 1207 ntBASIC19.84■□□□□ 0.77
CHD6Q8TD26 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms