Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BBS1Q8NFJ9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 AL499627.2-201ENST00000606283 725 ntBASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 AC010997.5-201ENST00000609182 354 ntBASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BBS1Q8NFJ9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
BBS1Q8NFJ9 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BBS1Q8NFJ9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.7
BBS1Q8NFJ9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BBS1Q8NFJ9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BBS1Q8NFJ9 AC026471.6-201ENST00000622954 1905 ntBASIC19.39■□□□□ 0.7
BBS1Q8NFJ9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 TSPY9P-201ENST00000440215 945 ntBASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 TSPY11P-201ENST00000442607 1045 ntBASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 Z92544.1-202ENST00000571933 1220 ntBASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.39■□□□□ 0.69
BBS1Q8NFJ9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BBS1Q8NFJ9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 AC239859.2-201ENST00000444165 318 ntBASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 SLC25A24-204ENST00000569674 2357 ntBASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
BBS1Q8NFJ9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 FEM1AP4-201ENST00000443167 1987 ntBASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
BBS1Q8NFJ9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
BBS1Q8NFJ9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
BBS1Q8NFJ9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
BBS1Q8NFJ9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms