Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.93■□□□□ 0.3
C3orf56Q8N813 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C3orf56Q8N813 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.92■□□□□ 0.3
C3orf56Q8N813 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C3orf56Q8N813 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C3orf56Q8N813 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C3orf56Q8N813 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C3orf56Q8N813 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C3orf56Q8N813 MIPEPP3-201ENST00000412105 444 ntBASIC16.92■□□□□ 0.3
C3orf56Q8N813 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.92■□□□□ 0.3
C3orf56Q8N813 CNN2P6-201ENST00000439038 900 ntBASIC16.92■□□□□ 0.3
C3orf56Q8N813 SLC7A5P1-201ENST00000568957 537 ntBASIC16.92■□□□□ 0.3
C3orf56Q8N813 DUSP8P4-201ENST00000399538 1761 ntBASIC16.92■□□□□ 0.3
C3orf56Q8N813 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
C3orf56Q8N813 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC16.91■□□□□ 0.3
C3orf56Q8N813 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C3orf56Q8N813 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
C3orf56Q8N813 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.91■□□□□ 0.3
C3orf56Q8N813 GCSHP5-201ENST00000443090 522 ntBASIC16.91■□□□□ 0.3
C3orf56Q8N813 RARRES2P4-201ENST00000514074 484 ntBASIC16.91■□□□□ 0.3
C3orf56Q8N813 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.91■□□□□ 0.3
C3orf56Q8N813 AC142381.4-202ENST00000563973 229 ntBASIC16.91■□□□□ 0.3
C3orf56Q8N813 AC008694.1-202ENST00000636953 945 ntBASIC16.91■□□□□ 0.3
C3orf56Q8N813 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C3orf56Q8N813 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C3orf56Q8N813 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C3orf56Q8N813 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.9■□□□□ 0.3
C3orf56Q8N813 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.9■□□□□ 0.3
C3orf56Q8N813 ESRRAP1-201ENST00000400596 1257 ntBASIC16.9■□□□□ 0.3
C3orf56Q8N813 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.9■□□□□ 0.3
C3orf56Q8N813 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.9■□□□□ 0.3
C3orf56Q8N813 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C3orf56Q8N813 AC013268.1-206ENST00000638368 961 ntBASIC16.9■□□□□ 0.3
C3orf56Q8N813 AC112229.1-201ENST00000639295 961 ntBASIC16.9■□□□□ 0.3
C3orf56Q8N813 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
C3orf56Q8N813 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C3orf56Q8N813 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.89■□□□□ 0.3
C3orf56Q8N813 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
C3orf56Q8N813 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.89■□□□□ 0.29
C3orf56Q8N813 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.89■□□□□ 0.29
C3orf56Q8N813 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
C3orf56Q8N813 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C3orf56Q8N813 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
C3orf56Q8N813 AC098590.1-201ENST00000468126 897 ntBASIC16.89■□□□□ 0.29
C3orf56Q8N813 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.89■□□□□ 0.29
C3orf56Q8N813 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
C3orf56Q8N813 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.89■□□□□ 0.29
C3orf56Q8N813 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.89■□□□□ 0.29
C3orf56Q8N813 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
C3orf56Q8N813 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
C3orf56Q8N813 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.88■□□□□ 0.29
C3orf56Q8N813 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.88■□□□□ 0.29
C3orf56Q8N813 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 AL596275.1-201ENST00000423464 877 ntBASIC16.88■□□□□ 0.29
C3orf56Q8N813 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.88■□□□□ 0.29
C3orf56Q8N813 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
C3orf56Q8N813 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
C3orf56Q8N813 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
C3orf56Q8N813 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
C3orf56Q8N813 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C3orf56Q8N813 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C3orf56Q8N813 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C3orf56Q8N813 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C3orf56Q8N813 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
C3orf56Q8N813 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 KRT18P20-201ENST00000548986 1279 ntBASIC16.87■□□□□ 0.29
C3orf56Q8N813 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.87■□□□□ 0.29
C3orf56Q8N813 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
C3orf56Q8N813 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms