Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CROCCP3Q8IVE0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CROCCP3Q8IVE0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 FEM1AP1-201ENST00000431297 1995 ntBASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CROCCP3Q8IVE0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 MIR3648-2-201ENST00000581792 180 ntBASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 AC026202.3-201ENST00000600805 1127 ntBASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 RAP2CP1-202ENST00000605179 643 ntBASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 MIR3648-1-201ENST00000615959 180 ntBASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CROCCP3Q8IVE0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.52■□□□□ 0.71
CROCCP3Q8IVE0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CROCCP3Q8IVE0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
CROCCP3Q8IVE0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 BX323043.1-201ENST00000641006 1765 ntBASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CROCCP3Q8IVE0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 FEM1AP4-201ENST00000443167 1987 ntBASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 AL592295.1-201ENST00000400984 884 ntBASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 AC007029.1-201ENST00000604183 313 ntBASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CROCCP3Q8IVE0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CROCCP3Q8IVE0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms