Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MIR6724-2-201ENST00000616483 92 ntBASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 MIR6724-4-201ENST00000617390 92 ntBASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 MIR6724-3-201ENST00000622482 92 ntBASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 FP325331.1-202ENST00000623531 1380 ntBASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CRLF3Q8IUI8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 SNX5-217ENST00000606557 1087 ntBASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CRLF3Q8IUI8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 AL117332.1-201ENST00000622628 974 ntBASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 AC009086.3-201ENST00000623486 1008 ntBASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CRLF3Q8IUI8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.45■■□□□ 1.02
CRLF3Q8IUI8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CRLF3Q8IUI8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CRLF3Q8IUI8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms