Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 KRT18P5-201ENST00000436075 1291 ntBASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 AP004607.7-201ENST00000527152 1677 ntBASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LIMS2Q7Z4I7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
LIMS2Q7Z4I7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 AL034346.1-201ENST00000568244 1277 ntBASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LIMS2Q7Z4I7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
LIMS2Q7Z4I7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
LIMS2Q7Z4I7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 AP004607.4-201ENST00000530158 1459 ntBASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 NTF6G-201ENST00000591094 616 ntBASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LIMS2Q7Z4I7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.92■■□□□ 1.26
LIMS2Q7Z4I7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms