Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM53Q6P2H8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TMEM53Q6P2H8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TMEM53Q6P2H8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TMEM53Q6P2H8 AC144652.1-201ENST00000609974 1624 ntBASIC19.58■□□□□ 0.73
TMEM53Q6P2H8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TMEM53Q6P2H8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM53Q6P2H8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.58■□□□□ 0.73
TMEM53Q6P2H8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM53Q6P2H8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TMEM53Q6P2H8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 AC092068.2-201ENST00000590491 1708 ntBASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 AL020996.1-203ENST00000536896 2307 ntBASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 AC079630.1-202ENST00000618127 1840 ntBASIC19.58■□□□□ 0.72
TMEM53Q6P2H8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 FP325331.1-202ENST00000623531 1380 ntBASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TMEM53Q6P2H8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 C17orf82-201ENST00000623772 1530 ntBASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TMEM53Q6P2H8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.55■□□□□ 0.72
TMEM53Q6P2H8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms