Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF220Q5VTB9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF220Q5VTB9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF220Q5VTB9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF220Q5VTB9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 Z92544.1-202ENST00000571933 1220 ntBASIC20.67■□□□□ 0.9
RNF220Q5VTB9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF220Q5VTB9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF220Q5VTB9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 AC005703.6-201ENST00000623265 1329 ntBASIC20.65■□□□□ 0.9
RNF220Q5VTB9 RARRES2P1-201ENST00000474487 481 ntBASIC20.65■□□□□ 0.9
RNF220Q5VTB9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF220Q5VTB9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF220Q5VTB9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF220Q5VTB9 KRT125P-201ENST00000546827 989 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms