Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRIF1Q5T3J3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 UNC93B8-201ENST00000511903 705 ntBASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRIF1Q5T3J3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.37■□□□□ 0.85
LRIF1Q5T3J3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 AC006455.2-201ENST00000429931 906 ntBASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRIF1Q5T3J3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 AC026471.6-201ENST00000622954 1905 ntBASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 pRNA.6-201ENST00000610482 90 ntBASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 pRNA.5-201ENST00000612139 90 ntBASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 pRNA.11-201ENST00000618423 90 ntBASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 pRNA.13-201ENST00000619112 90 ntBASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 FEM1AP4-201ENST00000443167 1987 ntBASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRIF1Q5T3J3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 OR7E47P-201ENST00000546390 1422 ntBASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.34■□□□□ 0.85
LRIF1Q5T3J3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 AC068587.7-201ENST00000641602 218 ntBASIC20.33■□□□□ 0.85
LRIF1Q5T3J3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.33■□□□□ 0.84
LRIF1Q5T3J3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LRIF1Q5T3J3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LRIF1Q5T3J3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.32■□□□□ 0.84
LRIF1Q5T3J3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms