Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01554Q52M75 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01554Q52M75 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LINC01554Q52M75 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
LINC01554Q52M75 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC01554Q52M75 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC01554Q52M75 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC01554Q52M75 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LINC01554Q52M75 MIR219A2-201ENST00000608502 1504 ntBASIC10.79□□□□□ -0.68
LINC01554Q52M75 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
LINC01554Q52M75 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC01554Q52M75 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 AC096887.2-201ENST00000623443 1957 ntBASIC10.79□□□□□ -0.68
LINC01554Q52M75 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
LINC01554Q52M75 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC01554Q52M75 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC10.78□□□□□ -0.68
LINC01554Q52M75 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LINC01554Q52M75 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01554Q52M75 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01554Q52M75 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01554Q52M75 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC10.77□□□□□ -0.68
LINC01554Q52M75 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LINC01554Q52M75 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC10.77□□□□□ -0.68
LINC01554Q52M75 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms