Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC3A1Q07837 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC3A1Q07837 AC005703.6-201ENST00000623265 1329 ntBASIC19.34■□□□□ 0.69
SLC3A1Q07837 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC3A1Q07837 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC3A1Q07837 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC3A1Q07837 LINC01529-204ENST00000636474 1715 ntBASIC19.34■□□□□ 0.69
SLC3A1Q07837 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC3A1Q07837 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.33■□□□□ 0.69
SLC3A1Q07837 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC3A1Q07837 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SLC3A1Q07837 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC3A1Q07837 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC3A1Q07837 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC3A1Q07837 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SLC3A1Q07837 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC3A1Q07837 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC3A1Q07837 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SLC3A1Q07837 AC005229.4-201ENST00000610085 2198 ntBASIC19.33■□□□□ 0.68
SLC3A1Q07837 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC3A1Q07837 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC3A1Q07837 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC3A1Q07837 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC3A1Q07837 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC3A1Q07837 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC3A1Q07837 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC3A1Q07837 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC3A1Q07837 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 SLC25A24-204ENST00000569674 2357 ntBASIC19.31■□□□□ 0.68
SLC3A1Q07837 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC3A1Q07837 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC3A1Q07837 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC3A1Q07837 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC3A1Q07837 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC3A1Q07837 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC3A1Q07837 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC3A1Q07837 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC3A1Q07837 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC3A1Q07837 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC3A1Q07837 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC3A1Q07837 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC3A1Q07837 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC3A1Q07837 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC3A1Q07837 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC3A1Q07837 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC3A1Q07837 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC3A1Q07837 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC3A1Q07837 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC3A1Q07837 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC3A1Q07837 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC3A1Q07837 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms