Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
KCNQ4P56696 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.88■■■□□ 2.05
KCNQ4P56696 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.87■■■□□ 2.05
KCNQ4P56696 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
KCNQ4P56696 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
KCNQ4P56696 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
KCNQ4P56696 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC27.87■■■□□ 2.05
KCNQ4P56696 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
KCNQ4P56696 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.87■■■□□ 2.05
KCNQ4P56696 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
KCNQ4P56696 AC055733.4-201ENST00000638462 1354 ntBASIC27.86■■■□□ 2.05
KCNQ4P56696 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
KCNQ4P56696 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.86■■■□□ 2.05
KCNQ4P56696 AC068338.2-201ENST00000563278 1430 ntBASIC27.86■■■□□ 2.05
KCNQ4P56696 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
KCNQ4P56696 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
KCNQ4P56696 AC093787.1-201ENST00000450396 207 ntBASIC27.86■■■□□ 2.05
KCNQ4P56696 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC27.86■■■□□ 2.05
KCNQ4P56696 RARRES2P4-201ENST00000514074 484 ntBASIC27.86■■■□□ 2.05
KCNQ4P56696 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.86■■■□□ 2.05
KCNQ4P56696 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
KCNQ4P56696 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
KCNQ4P56696 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.85■■■□□ 2.05
KCNQ4P56696 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.85■■■□□ 2.05
KCNQ4P56696 AL596275.1-201ENST00000423464 877 ntBASIC27.85■■■□□ 2.05
KCNQ4P56696 CYP2T1P-201ENST00000432607 1285 ntBASIC27.85■■■□□ 2.05
KCNQ4P56696 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.85■■■□□ 2.05
KCNQ4P56696 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.85■■■□□ 2.05
KCNQ4P56696 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.85■■■□□ 2.05
KCNQ4P56696 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
KCNQ4P56696 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
KCNQ4P56696 MKRN4P-201ENST00000444706 1521 ntBASIC27.85■■■□□ 2.05
KCNQ4P56696 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
KCNQ4P56696 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.85■■■□□ 2.05
KCNQ4P56696 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
KCNQ4P56696 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.84■■■□□ 2.05
KCNQ4P56696 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
KCNQ4P56696 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC27.84■■■□□ 2.05
KCNQ4P56696 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.84■■■□□ 2.05
KCNQ4P56696 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.84■■■□□ 2.05
KCNQ4P56696 AC004812.2-201ENST00000611079 2094 ntBASIC27.83■■■□□ 2.05
KCNQ4P56696 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
KCNQ4P56696 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
KCNQ4P56696 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNQ4P56696 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.83■■■□□ 2.05
KCNQ4P56696 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.83■■■□□ 2.05
KCNQ4P56696 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
KCNQ4P56696 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC27.83■■■□□ 2.05
KCNQ4P56696 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.83■■■□□ 2.05
KCNQ4P56696 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNQ4P56696 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
KCNQ4P56696 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
KCNQ4P56696 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.04
KCNQ4P56696 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
KCNQ4P56696 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.82■■■□□ 2.04
KCNQ4P56696 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.82■■■□□ 2.04
KCNQ4P56696 AC010141.2-201ENST00000452426 721 ntBASIC27.82■■■□□ 2.04
KCNQ4P56696 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.82■■■□□ 2.04
KCNQ4P56696 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
KCNQ4P56696 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
KCNQ4P56696 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
KCNQ4P56696 AC142381.3-201ENST00000568208 1670 ntBASIC27.81■■■□□ 2.04
KCNQ4P56696 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.81■■■□□ 2.04
KCNQ4P56696 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
KCNQ4P56696 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
KCNQ4P56696 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
KCNQ4P56696 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.81■■■□□ 2.04
KCNQ4P56696 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.81■■■□□ 2.04
KCNQ4P56696 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.81■■■□□ 2.04
KCNQ4P56696 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
KCNQ4P56696 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
KCNQ4P56696 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
KCNQ4P56696 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.8■■■□□ 2.04
KCNQ4P56696 GCSHP5-201ENST00000443090 522 ntBASIC27.8■■■□□ 2.04
KCNQ4P56696 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
KCNQ4P56696 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.8■■■□□ 2.04
KCNQ4P56696 AC083880.1-201ENST00000608266 535 ntBASIC27.8■■■□□ 2.04
KCNQ4P56696 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.8■■■□□ 2.04
KCNQ4P56696 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.8■■■□□ 2.04
KCNQ4P56696 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNQ4P56696 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC27.79■■■□□ 2.04
KCNQ4P56696 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
KCNQ4P56696 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.79■■■□□ 2.04
KCNQ4P56696 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNQ4P56696 AC016405.3-201ENST00000607710 860 ntBASIC27.79■■■□□ 2.04
KCNQ4P56696 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
KCNQ4P56696 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
KCNQ4P56696 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
KCNQ4P56696 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.78■■■□□ 2.04
KCNQ4P56696 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
KCNQ4P56696 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.78■■■□□ 2.04
KCNQ4P56696 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
KCNQ4P56696 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms