Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 NAA60-206ENST00000570372 398 ntTSL 58.95□□□□□ -0.986e-6■■■■□ 21.3
NCBP2P52298 NAA60-222ENST00000573617 279 ntTSL 28.95□□□□□ -0.986e-6■■■■□ 21.3
NCBP2P52298 DLEU1-206ENST00000463474 1048 ntTSL 1 (best) BASIC8.79□□□□□ -16e-6■■■■□ 21.3
NCBP2P52298 DLEU1-220ENST00000478860 602 ntTSL 1 (best) BASIC8.79□□□□□ -16e-6■■■■□ 21.3
NCBP2P52298 NAA60-218ENST00000573201 657 ntTSL 38.6□□□□□ -1.036e-6■■■■□ 21.3
NCBP2P52298 TASP1-205ENST00000476108 829 ntTSL 58.57□□□□□ -1.046e-6■■■■□ 21.3
NCBP2P52298 TASP1-207ENST00000483898 754 ntTSL 58.57□□□□□ -1.046e-6■■■■□ 21.3
NCBP2P52298 C9orf85-202ENST00000377027 539 ntTSL 38.55□□□□□ -1.044e-11■■■■□ 21.3
NCBP2P52298 TASP1-203ENST00000455532 1000 ntTSL 58.52□□□□□ -1.056e-6■■■■□ 21.3
NCBP2P52298 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC8.39□□□□□ -1.076e-6■■■■□ 21.3
NCBP2P52298 RPL4-210ENST00000566039 1099 ntTSL 27.89□□□□□ -1.156e-9■■■■□ 21.3
NCBP2P52298 RPL4-203ENST00000561775 1396 ntTSL 57.26□□□□□ -1.256e-9■■■■□ 21.3
NCBP2P52298 MIR22HG-202ENST00000570416 535 ntTSL 36.7□□□□□ -1.346e-6■■■■□ 21.3
NCBP2P52298 NAA60-223ENST00000574256 266 ntTSL 36.49□□□□□ -1.376e-6■■■■□ 21.3
NCBP2P52298 NAA60-232ENST00000575936 547 ntTSL 46.49□□□□□ -1.376e-6■■■■□ 21.3
NCBP2P52298 NAA60-213ENST00000572169 582 ntTSL 26.26□□□□□ -1.416e-6■■■■□ 21.3
NCBP2P52298 NAA60-226ENST00000574762 537 ntTSL 26.26□□□□□ -1.416e-6■■■■□ 21.3
NCBP2P52298 NAA60-216ENST00000572757 818 ntTSL 25.64□□□□□ -1.516e-6■■■■□ 21.3
NCBP2P52298 LSM1-202ENST00000520286 776 ntTSL 1 (best)5.11□□□□□ -1.596e-6■■■■□ 21.3
NCBP2P52298 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.54□□□□□ -1.686e-6■■■■□ 21.3
NCBP2P52298 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.33□□□□□ -1.726e-6■■■■□ 21.3
NCBP2P52298 NAA60-228ENST00000575042 328 ntTSL 33.94□□□□□ -1.786e-6■■■■□ 21.3
NCBP2P52298 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.18□□□□□ -1.96e-6■■■■□ 21.3
NCBP2P52298 IFT81-203ENST00000546374 1171 ntTSL 53.03□□□□□ -1.926e-6■■■■□ 21.3
NCBP2P52298 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.39□□□□□ -2.036e-6■■■■□ 21.3
NCBP2P52298 NBR2-204ENST00000587322 63 ntBASIC1.45□□□□□ -2.186e-6■■■■□ 21.3
NCBP2P52298 AP1G2-223ENST00000556277 891 ntTSL 515.29■□□□□ 0.046e-7■■■■□ 21.2
NCBP2P52298 AP1G2-231ENST00000557189 678 ntTSL 214.85□□□□□ -0.036e-7■■■■□ 21.2
NCBP2P52298 AP1G2-225ENST00000556743 1456 ntTSL 1 (best)13.48□□□□□ -0.256e-7■■■■□ 21.2
NCBP2P52298 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.256e-7■■■■□ 21.2
NCBP2P52298 AP1G2-207ENST00000553685 561 ntTSL 1 (best)13.28□□□□□ -0.286e-7■■■■□ 21.2
NCBP2P52298 AP1G2-208ENST00000553756 656 ntTSL 312.44□□□□□ -0.426e-7■■■■□ 21.2
NCBP2P52298 AP1G2-206ENST00000553629 1301 ntTSL 1 (best)12.39□□□□□ -0.436e-7■■■■□ 21.2
NCBP2P52298 AP1G2-234ENST00000557619 1004 ntTSL 212□□□□□ -0.496e-7■■■■□ 21.2
NCBP2P52298 AP1G2-203ENST00000460049 2672 ntTSL 1 (best)11.92□□□□□ -0.56e-7■■■■□ 21.2
NCBP2P52298 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.636e-7■■■■□ 21.2
NCBP2P52298 AP1G2-227ENST00000556943 747 ntTSL 39.95□□□□□ -0.826e-7■■■■□ 21.2
NCBP2P52298 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.06□□□□□ -0.162e-7■■■■□ 21.2
NCBP2P52298 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.22e-7■■■■□ 21.2
NCBP2P52298 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.029e-10■■■■□ 21.2
NCBP2P52298 EPC2-205ENST00000457184 724 ntTSL 517.04■□□□□ 0.323e-8■■■■□ 21.1
NCBP2P52298 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.435e-10■■■■□ 21.1
NCBP2P52298 ZNF529-201ENST00000334116 5238 ntTSL 2 BASIC10.6□□□□□ -0.715e-10■■■■□ 21.1
NCBP2P52298 ZNF529-203ENST00000585960 535 ntTSL 49.08□□□□□ -0.965e-10■■■■□ 21.1
NCBP2P52298 ZNF529-205ENST00000586115 587 ntTSL 48.69□□□□□ -1.025e-10■■■■□ 21.1
NCBP2P52298 ZNF529-204ENST00000585983 582 ntTSL 36.15□□□□□ -1.425e-10■■■■□ 21.1
NCBP2P52298 SREK1-207ENST00000520058 559 ntTSL 217.02■□□□□ 0.327e-9■■■■□ 21.1
NCBP2P52298 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.52■□□□□ 0.247e-9■■■■□ 21.1
NCBP2P52298 SREK1-212ENST00000522912 2047 ntTSL 1 (best)15.94■□□□□ 0.147e-9■■■■□ 21.1
NCBP2P52298 SREK1-214ENST00000523851 458 ntTSL 314.93□□□□□ -0.027e-9■■■■□ 21.1
NCBP2P52298 SREK1-209ENST00000520953 2172 ntTSL 514.15□□□□□ -0.157e-9■■■■□ 21.1
NCBP2P52298 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.657e-9■■■■□ 21.1
NCBP2P52298 SREK1-215ENST00000524111 4074 ntTSL 58.34□□□□□ -1.077e-9■■■■□ 21.1
NCBP2P52298 SREK1-210ENST00000521691 580 ntTSL 31.67□□□□□ -2.147e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-204ENST00000372358 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.781e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-201ENST00000372350 606 ntTSL 59.98□□□□□ -0.811e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-202ENST00000372351 1885 ntTSL 5 BASIC9.39□□□□□ -0.911e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC8.85□□□□□ -0.991e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC8.53□□□□□ -1.041e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-205ENST00000430138 2533 ntTSL 28.53□□□□□ -1.041e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-206ENST00000463488 699 ntTSL 28.35□□□□□ -1.071e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-210ENST00000495699 709 ntTSL 38.35□□□□□ -1.071e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-208ENST00000490641 699 ntTSL 37.36□□□□□ -1.231e-9■■■■□ 21.1
NCBP2P52298 EXOSC2-209ENST00000491115 739 ntTSL 57.26□□□□□ -1.251e-9■■■■□ 21.1
NCBP2P52298 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.322e-7■■■■□ 21.1
NCBP2P52298 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.593e-21■■■■□ 21.1
NCBP2P52298 BDH1-204ENST00000431056 453 ntTSL 510.75□□□□□ -0.693e-21■■■■□ 21.1
NCBP2P52298 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.52■□□□□ 0.396e-6■■■■□ 21
NCBP2P52298 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.41□□□□□ -0.16e-6■■■■□ 21
NCBP2P52298 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.126e-6■■■■□ 21
NCBP2P52298 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.3□□□□□ -0.286e-6■■■■□ 21
NCBP2P52298 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.316e-6■■■■□ 21
NCBP2P52298 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.04□□□□□ -0.326e-6■■■■□ 21
NCBP2P52298 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.04□□□□□ -0.326e-6■■■■□ 21
NCBP2P52298 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.646e-6■■■■□ 21
NCBP2P52298 ZCCHC17-203ENST00000479629 761 ntTSL 210.51□□□□□ -0.736e-6■■■■□ 21
NCBP2P52298 ZCCHC17-209ENST00000627541 1158 ntTSL 5 BASIC7.53□□□□□ -1.26e-6■■■■□ 21
NCBP2P52298 SDR39U1-209ENST00000554947 1203 ntTSL 222.44■■□□□ 1.189e-26■■■■□ 21
NCBP2P52298 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.93■□□□□ 0.789e-26■■■■□ 21
NCBP2P52298 SDR39U1-216ENST00000556175 775 ntTSL 319.6■□□□□ 0.739e-26■■■■□ 21
NCBP2P52298 SDR39U1-203ENST00000544691 1507 ntTSL 1 (best)17.92■□□□□ 0.469e-26■■■■□ 21
NCBP2P52298 SDR39U1-218ENST00000556262 1960 ntTSL 217.62■□□□□ 0.419e-26■■■■□ 21
NCBP2P52298 SDR39U1-220ENST00000556548 2336 ntTSL 217.35■□□□□ 0.379e-26■■■■□ 21
NCBP2P52298 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.94■□□□□ 0.149e-26■■■■□ 21
NCBP2P52298 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.149e-26■■■■□ 21
NCBP2P52298 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.49□□□□□ -0.099e-26■■■■□ 21
NCBP2P52298 SDR39U1-215ENST00000555830 418 ntTSL 314.48□□□□□ -0.099e-26■■■■□ 21
NCBP2P52298 SDR39U1-207ENST00000553937 217 ntTSL 38.25□□□□□ -1.099e-26■■■■□ 21
NCBP2P52298 DCAF6-202ENST00000367840 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.185e-21■■■■□ 21
NCBP2P52298 TRIP12-215ENST00000479037 2938 ntTSL 1 (best)12.61□□□□□ -0.391e-9■■■■□ 21
NCBP2P52298 TRIP12-209ENST00000435716 603 ntTSL 38.05□□□□□ -1.121e-9■■■■□ 21
NCBP2P52298 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.371e-9■■■■□ 21
NCBP2P52298 ZNF189-203ENST00000374861 3134 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.656e-7■■■■□ 21
NCBP2P52298 RXRA-203ENST00000484822 5215 ntTSL 214.66□□□□□ -0.061e-6■■■■□ 20.9
NCBP2P52298 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.573e-7■■■■□ 20.9
NCBP2P52298 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.431e-6■■■■□ 20.9
NCBP2P52298 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.111e-6■■■■□ 20.9
NCBP2P52298 ACAP3-208ENST00000472541 1946 ntTSL 518.15■□□□□ 0.54e-8■■■■□ 20.8
NCBP2P52298 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.414e-8■■■■□ 20.8
NCBP2P52298 TMEM50B-204ENST00000442441 982 ntTSL 1 (best)18.24■□□□□ 0.515e-10■■■■□ 20.8
Retrieved 100 of 18,329 protein–RNA pairs in 135.1 ms