Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 YOL106WYOL106W 354 nt5.14□□□□□ -1.59
NMD2P38798 ERV15YBR210W 429 nt5.14□□□□□ -1.59
NMD2P38798 YBR242WYBR242W 717 nt5.14□□□□□ -1.59
NMD2P38798 RNA14YMR061W 2034 nt5.14□□□□□ -1.59
NMD2P38798 YBR238CYBR238C 2196 nt5.14□□□□□ -1.59
NMD2P38798 YCR023CYCR023C 1836 nt5.13□□□□□ -1.59
NMD2P38798 BRE4YDL231C 3378 nt5.13□□□□□ -1.59
NMD2P38798 OLE1YGL055W 1533 nt5.13□□□□□ -1.59
NMD2P38798 RPG1YBR079C 2895 nt5.13□□□□□ -1.59
NMD2P38798 YDR131CYDR131C 1671 nt5.13□□□□□ -1.59
NMD2P38798 TSC13YDL015C 933 nt5.13□□□□□ -1.59
NMD2P38798 CBS2YDR197W 1170 nt5.13□□□□□ -1.59
NMD2P38798 SPT3YDR392W 1014 nt5.13□□□□□ -1.59
NMD2P38798 RPL22BYFL034C-A 369 nt5.13□□□□□ -1.59
NMD2P38798 YFR057WYFR057W 456 nt5.13□□□□□ -1.59
NMD2P38798 YGL230CYGL230C 444 nt5.13□□□□□ -1.59
NMD2P38798 PET130YJL023C 1044 nt5.13□□□□□ -1.59
NMD2P38798 GPI12YMR281W 915 nt5.13□□□□□ -1.59
NMD2P38798 LYS2YBR115C 4179 nt5.13□□□□□ -1.59
NMD2P38798 BI3Q0115 1554 nt5.12□□□□□ -1.59
NMD2P38798 ORC4YPR162C 1590 nt5.12□□□□□ -1.59
NMD2P38798 CUE3YGL110C 1875 nt5.12□□□□□ -1.59
NMD2P38798 UBC9YDL064W 474 nt5.12□□□□□ -1.59
NMD2P38798 KRE28YDR532C 1158 nt5.12□□□□□ -1.59
NMD2P38798 YDR535CYDR535C 501 nt5.12□□□□□ -1.59
NMD2P38798 tQ(UUG)CtQ(UUG)C 72 nt5.12□□□□□ -1.59
NMD2P38798 tQ(UUG)D1tQ(UUG)D1 72 nt5.12□□□□□ -1.59
NMD2P38798 tQ(UUG)D2tQ(UUG)D2 72 nt5.12□□□□□ -1.59
NMD2P38798 tQ(UUG)D3tQ(UUG)D3 72 nt5.12□□□□□ -1.59
NMD2P38798 tQ(UUG)E1tQ(UUG)E1 72 nt5.12□□□□□ -1.59
NMD2P38798 tQ(UUG)HtQ(UUG)H 72 nt5.12□□□□□ -1.59
NMD2P38798 tQ(UUG)LtQ(UUG)L 72 nt5.12□□□□□ -1.59
NMD2P38798 YIL171WYIL171W 330 nt5.12□□□□□ -1.59
NMD2P38798 GCD14YJL125C 1152 nt5.12□□□□□ -1.59
NMD2P38798 TRI1YMR233W 681 nt5.12□□□□□ -1.59
NMD2P38798 FMP41YNL168C 780 nt5.12□□□□□ -1.59
NMD2P38798 YPL077CYPL077C 723 nt5.12□□□□□ -1.59
NMD2P38798 YPR027CYPR027C 834 nt5.12□□□□□ -1.59
NMD2P38798 YCL022CYCL022C 516 nt5.12□□□□□ -1.59
NMD2P38798 BUD16YEL029C 939 nt5.11□□□□□ -1.59
NMD2P38798 YAR030CYAR030C 342 nt5.11□□□□□ -1.59
NMD2P38798 YML053CYML053C 639 nt5.11□□□□□ -1.59
NMD2P38798 MER1YNL210W 813 nt5.11□□□□□ -1.59
NMD2P38798 UBP12YJL197W 3765 nt5.1□□□□□ -1.59
NMD2P38798 BUD5YCR038C 1929 nt5.1□□□□□ -1.59
NMD2P38798 GDH2YDL215C 3279 nt5.1□□□□□ -1.59
NMD2P38798 RSC3YDR303C 2658 nt5.1□□□□□ -1.59
NMD2P38798 COM2YER130C 1332 nt5.1□□□□□ -1.59
NMD2P38798 BAT2YJR148W 1131 nt5.1□□□□□ -1.59
NMD2P38798 EPO1YMR124W 2832 nt5.1□□□□□ -1.59
NMD2P38798 YMR310CYMR310C 954 nt5.1□□□□□ -1.59
NMD2P38798 FOX2YKR009C 2703 nt5.1□□□□□ -1.59
NMD2P38798 TRF5YNL299W 1929 nt5.09□□□□□ -1.59
NMD2P38798 HOYDL227C 1761 nt5.09□□□□□ -1.59
NMD2P38798 PEX30YLR324W 1572 nt5.09□□□□□ -1.59
NMD2P38798 SRB7YDR308C 423 nt5.09□□□□□ -1.59
NMD2P38798 VMA7YGR020C 357 nt5.09□□□□□ -1.59
NMD2P38798 TDA10YGR205W 873 nt5.09□□□□□ -1.59
NMD2P38798 YVH1YIR026C 1095 nt5.09□□□□□ -1.59
NMD2P38798 RAD27YKL113C 1149 nt5.09□□□□□ -1.59
NMD2P38798 YAR075WYAR075W 474 nt5.09□□□□□ -1.59
NMD2P38798 YML031C-AYML031C-A 336 nt5.09□□□□□ -1.59
NMD2P38798 YBL029C-AYBL029C-A 285 nt5.09□□□□□ -1.59
NMD2P38798 YPL109CYPL109C 1974 nt5.09□□□□□ -1.6
NMD2P38798 NTH1YDR001C 2256 nt5.08□□□□□ -1.6
NMD2P38798 RPN9YDR427W 1182 nt5.08□□□□□ -1.6
NMD2P38798 YGL204CYGL204C 306 nt5.08□□□□□ -1.6
NMD2P38798 RDN5-1RDN5-1 121 nt5.08□□□□□ -1.6
NMD2P38798 RDN5-6RDN5-6 121 nt5.08□□□□□ -1.6
NMD2P38798 SSO2YMR183C 888 nt5.08□□□□□ -1.6
NMD2P38798 YBR116CYBR116C 528 nt5.08□□□□□ -1.6
NMD2P38798 NUG1YER006W 1563 nt5.08□□□□□ -1.6
NMD2P38798 LAS1YKR063C 1509 nt5.07□□□□□ -1.6
NMD2P38798 ISW2YOR304W 3363 nt5.07□□□□□ -1.6
NMD2P38798 CIT1YNR001C 1440 nt5.07□□□□□ -1.6
NMD2P38798 YPR148CYPR148C 1308 nt5.07□□□□□ -1.6
NMD2P38798 COX4YGL187C 468 nt5.07□□□□□ -1.6
NMD2P38798 YAL034C-BYAL034C-B 354 nt5.07□□□□□ -1.6
NMD2P38798 ISA1YLL027W 753 nt5.07□□□□□ -1.6
NMD2P38798 CSM3YMR048W 954 nt5.07□□□□□ -1.6
NMD2P38798 MRPL17YNL252C 846 nt5.07□□□□□ -1.6
NMD2P38798 SIL1YOL031C 1266 nt5.07□□□□□ -1.6
NMD2P38798 FIG1YBR040W 897 nt5.07□□□□□ -1.6
NMD2P38798 YPR078CYPR078C 1119 nt5.07□□□□□ -1.6
NMD2P38798 POP4YBR257W 840 nt5.07□□□□□ -1.6
NMD2P38798 RAD1YPL022W 3303 nt5.07□□□□□ -1.6
NMD2P38798 EGT2YNL327W 3126 nt5.06□□□□□ -1.6
NMD2P38798 YLR152CYLR152C 1731 nt5.06□□□□□ -1.6
NMD2P38798 AIM21YIR003W 2040 nt5.06□□□□□ -1.6
NMD2P38798 RPS25AYGR027C 327 nt5.06□□□□□ -1.6
NMD2P38798 YJL218WYJL218W 591 nt5.06□□□□□ -1.6
NMD2P38798 PAM18YLR008C 507 nt5.06□□□□□ -1.6
NMD2P38798 YMR158C-AYMR158C-A 138 nt5.06□□□□□ -1.6
NMD2P38798 ACK1YDL203C 1872 nt5.06□□□□□ -1.6
NMD2P38798 YSH1YLR277C 2340 nt5.06□□□□□ -1.6
NMD2P38798 VAC7YNL054W 3498 nt5.06□□□□□ -1.6
NMD2P38798 VPS45YGL095C 1734 nt5.06□□□□□ -1.6
NMD2P38798 HCM1YCR065W 1695 nt5.05□□□□□ -1.6
NMD2P38798 TRM11YOL124C 1302 nt5.05□□□□□ -1.6
NMD2P38798 THI13YDL244W 1023 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms