Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.43■□□□□ 0.86
KRT20P35900 AC133637.1-201ENST00000624115 1537 ntBASIC20.43■□□□□ 0.86
KRT20P35900 AC139530.1-201ENST00000575312 1977 ntBASIC20.43■□□□□ 0.86
KRT20P35900 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.43■□□□□ 0.86
KRT20P35900 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT20P35900 UNC93B3-201ENST00000308076 687 ntBASIC20.43■□□□□ 0.86
KRT20P35900 SERBP1P1-201ENST00000396021 1160 ntBASIC20.43■□□□□ 0.86
KRT20P35900 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT20P35900 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.43■□□□□ 0.86
KRT20P35900 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
KRT20P35900 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
KRT20P35900 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.43■□□□□ 0.86
KRT20P35900 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT20P35900 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT20P35900 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.43■□□□□ 0.86
KRT20P35900 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KRT20P35900 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KRT20P35900 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
KRT20P35900 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
KRT20P35900 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 C11orf96-202ENST00000528572 1834 ntBASIC20.42■□□□□ 0.86
KRT20P35900 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
KRT20P35900 AC096631.2-201ENST00000436136 790 ntBASIC20.42■□□□□ 0.86
KRT20P35900 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.42■□□□□ 0.86
KRT20P35900 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT20P35900 AC004687.1-201ENST00000579003 1625 ntBASIC20.42■□□□□ 0.86
KRT20P35900 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRT20P35900 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRT20P35900 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT20P35900 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRT20P35900 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KRT20P35900 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KRT20P35900 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.41■□□□□ 0.86
KRT20P35900 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 AL136162.1-201ENST00000607711 1078 ntBASIC20.41■□□□□ 0.86
KRT20P35900 AC011298.3-201ENST00000615796 283 ntBASIC20.41■□□□□ 0.86
KRT20P35900 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT20P35900 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
KRT20P35900 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT20P35900 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KRT20P35900 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT20P35900 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT20P35900 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT20P35900 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KRT20P35900 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT20P35900 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
KRT20P35900 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
KRT20P35900 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
KRT20P35900 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT20P35900 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT20P35900 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KRT20P35900 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT20P35900 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT20P35900 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT20P35900 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT20P35900 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT20P35900 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT20P35900 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
KRT20P35900 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT20P35900 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT20P35900 AC092053.2-201ENST00000640557 1818 ntBASIC20.39■□□□□ 0.86
KRT20P35900 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT20P35900 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KRT20P35900 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 AC135279.3-201ENST00000610945 1311 ntBASIC20.39■□□□□ 0.85
KRT20P35900 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT20P35900 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT20P35900 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT20P35900 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT20P35900 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KRT20P35900 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KRT20P35900 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms