Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CCND1P24385 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.63■■□□□ 1.05
CCND1P24385 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCND1P24385 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CCND1P24385 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCND1P24385 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.63■■□□□ 1.05
CCND1P24385 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.63■■□□□ 1.05
CCND1P24385 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCND1P24385 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCND1P24385 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCND1P24385 AL353803.4-201ENST00000565882 1934 ntBASIC21.63■■□□□ 1.05
CCND1P24385 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.62■■□□□ 1.05
CCND1P24385 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.62■■□□□ 1.05
CCND1P24385 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CCND1P24385 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.62■■□□□ 1.05
CCND1P24385 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
CCND1P24385 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.62■■□□□ 1.05
CCND1P24385 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.62■■□□□ 1.05
CCND1P24385 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 DUX4L4-201ENST00000566884 1269 ntBASIC21.62■■□□□ 1.05
CCND1P24385 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 AC241377.3-202ENST00000626088 1088 ntBASIC21.62■■□□□ 1.05
CCND1P24385 AC241585.3-202ENST00000628937 1088 ntBASIC21.62■■□□□ 1.05
CCND1P24385 AC245100.8-202ENST00000629247 1058 ntBASIC21.62■■□□□ 1.05
CCND1P24385 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.62■■□□□ 1.05
CCND1P24385 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.62■■□□□ 1.05
CCND1P24385 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCND1P24385 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CCND1P24385 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.62■■□□□ 1.05
CCND1P24385 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCND1P24385 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCND1P24385 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCND1P24385 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCND1P24385 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.61■■□□□ 1.05
CCND1P24385 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.61■■□□□ 1.05
CCND1P24385 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.61■■□□□ 1.05
CCND1P24385 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCND1P24385 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CCND1P24385 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCND1P24385 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.61■■□□□ 1.05
CCND1P24385 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCND1P24385 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCND1P24385 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCND1P24385 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.6■■□□□ 1.05
CCND1P24385 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.6■■□□□ 1.05
CCND1P24385 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.6■■□□□ 1.05
CCND1P24385 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCND1P24385 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.6■■□□□ 1.05
CCND1P24385 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CCND1P24385 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCND1P24385 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCND1P24385 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCND1P24385 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.59■■□□□ 1.05
CCND1P24385 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.59■■□□□ 1.05
CCND1P24385 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCND1P24385 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.59■■□□□ 1.05
CCND1P24385 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCND1P24385 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.59■■□□□ 1.05
CCND1P24385 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.59■■□□□ 1.05
CCND1P24385 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCND1P24385 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCND1P24385 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCND1P24385 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCND1P24385 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCND1P24385 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCND1P24385 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.59■■□□□ 1.05
CCND1P24385 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.59■■□□□ 1.05
CCND1P24385 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.59■■□□□ 1.05
CCND1P24385 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCND1P24385 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCND1P24385 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCND1P24385 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.58■■□□□ 1.05
CCND1P24385 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.58■■□□□ 1.05
CCND1P24385 AL512631.2-201ENST00000604634 923 ntBASIC21.58■■□□□ 1.05
CCND1P24385 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCND1P24385 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCND1P24385 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCND1P24385 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CCND1P24385 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
CCND1P24385 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CCND1P24385 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCND1P24385 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCND1P24385 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCND1P24385 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCND1P24385 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCND1P24385 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCND1P24385 AC005229.4-201ENST00000610085 2198 ntBASIC21.57■■□□□ 1.04
CCND1P24385 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms