Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 TSPY13P-201ENST00000338964 914 ntBASIC18.84■□□□□ 0.61
SRMP19623 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.84■□□□□ 0.61
SRMP19623 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.84■□□□□ 0.61
SRMP19623 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.84■□□□□ 0.61
SRMP19623 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.84■□□□□ 0.61
SRMP19623 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
SRMP19623 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRMP19623 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRMP19623 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.83■□□□□ 0.61
SRMP19623 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRMP19623 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.83■□□□□ 0.61
SRMP19623 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
SRMP19623 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRMP19623 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SRMP19623 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRMP19623 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRMP19623 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRMP19623 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SRMP19623 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRMP19623 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRMP19623 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRMP19623 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.82■□□□□ 0.6
SRMP19623 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.82■□□□□ 0.6
SRMP19623 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.82■□□□□ 0.6
SRMP19623 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRMP19623 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SRMP19623 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
SRMP19623 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.81■□□□□ 0.6
SRMP19623 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.81■□□□□ 0.6
SRMP19623 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.81■□□□□ 0.6
SRMP19623 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.81■□□□□ 0.6
SRMP19623 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.81■□□□□ 0.6
SRMP19623 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.81■□□□□ 0.6
SRMP19623 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.81■□□□□ 0.6
SRMP19623 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.81■□□□□ 0.6
SRMP19623 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRMP19623 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.81■□□□□ 0.6
SRMP19623 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SRMP19623 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.8■□□□□ 0.6
SRMP19623 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SRMP19623 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 AC103834.1-201ENST00000520383 144 ntBASIC18.8■□□□□ 0.6
SRMP19623 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.8■□□□□ 0.6
SRMP19623 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 AL157384.1-201ENST00000445995 2473 ntBASIC18.8■□□□□ 0.6
SRMP19623 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.8■□□□□ 0.6
SRMP19623 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.8■□□□□ 0.6
SRMP19623 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRMP19623 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.79■□□□□ 0.6
SRMP19623 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRMP19623 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRMP19623 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRMP19623 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.79■□□□□ 0.6
SRMP19623 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.79■□□□□ 0.6
SRMP19623 AC103724.3-201ENST00000564481 992 ntBASIC18.79■□□□□ 0.6
SRMP19623 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SRMP19623 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRMP19623 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRMP19623 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRMP19623 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.79■□□□□ 0.6
SRMP19623 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
SRMP19623 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SRMP19623 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SRMP19623 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.78■□□□□ 0.6
SRMP19623 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SRMP19623 AC009102.2-201ENST00000606772 1639 ntBASIC18.78■□□□□ 0.6
SRMP19623 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRMP19623 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 450.4 ms