Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 C17orf82-201ENST00000623772 1530 ntBASIC18.32■□□□□ 0.52
HIST1H1DP16402 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H1DP16402 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H1DP16402 SLC25A24-204ENST00000569674 2357 ntBASIC18.32■□□□□ 0.52
HIST1H1DP16402 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HIST1H1DP16402 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H1DP16402 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1DP16402 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST1H1DP16402 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.31■□□□□ 0.52
HIST1H1DP16402 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H1DP16402 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1DP16402 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HIST1H1DP16402 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.31■□□□□ 0.52
HIST1H1DP16402 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HIST1H1DP16402 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HIST1H1DP16402 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.3■□□□□ 0.52
HIST1H1DP16402 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST1H1DP16402 FEM1AP4-201ENST00000443167 1987 ntBASIC18.3■□□□□ 0.52
HIST1H1DP16402 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HIST1H1DP16402 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.3■□□□□ 0.52
HIST1H1DP16402 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.3■□□□□ 0.52
HIST1H1DP16402 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HIST1H1DP16402 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIST1H1DP16402 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
HIST1H1DP16402 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIST1H1DP16402 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HIST1H1DP16402 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HIST1H1DP16402 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST1H1DP16402 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.29■□□□□ 0.52
HIST1H1DP16402 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 AL499627.2-201ENST00000606283 725 ntBASIC18.29■□□□□ 0.52
HIST1H1DP16402 AC092028.1-203ENST00000608262 953 ntBASIC18.29■□□□□ 0.52
HIST1H1DP16402 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIST1H1DP16402 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HIST1H1DP16402 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 AF106564.1-201ENST00000607058 2553 ntBASIC18.28■□□□□ 0.52
HIST1H1DP16402 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIST1H1DP16402 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1DP16402 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIST1H1DP16402 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST1H1DP16402 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HIST1H1DP16402 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1DP16402 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST1H1DP16402 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.27■□□□□ 0.52
HIST1H1DP16402 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1DP16402 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1DP16402 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HIST1H1DP16402 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.27■□□□□ 0.52
HIST1H1DP16402 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.27■□□□□ 0.51
HIST1H1DP16402 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HIST1H1DP16402 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HIST1H1DP16402 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HIST1H1DP16402 MTDHP2-201ENST00000601468 714 ntBASIC18.26■□□□□ 0.51
HIST1H1DP16402 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HIST1H1DP16402 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms