Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.59■□□□□ 0.89
CTSBP07858 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSBP07858 AC022517.1-201ENST00000592429 346 ntBASIC20.59■□□□□ 0.89
CTSBP07858 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.59■□□□□ 0.89
CTSBP07858 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSBP07858 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CTSBP07858 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSBP07858 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CTSBP07858 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTSBP07858 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSBP07858 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CTSBP07858 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
CTSBP07858 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CTSBP07858 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.58■□□□□ 0.89
CTSBP07858 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.58■□□□□ 0.89
CTSBP07858 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSBP07858 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.58■□□□□ 0.88
CTSBP07858 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.58■□□□□ 0.88
CTSBP07858 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CTSBP07858 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CTSBP07858 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.58■□□□□ 0.88
CTSBP07858 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSBP07858 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.57■□□□□ 0.88
CTSBP07858 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CTSBP07858 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.57■□□□□ 0.88
CTSBP07858 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSBP07858 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.57■□□□□ 0.88
CTSBP07858 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.57■□□□□ 0.88
CTSBP07858 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.57■□□□□ 0.88
CTSBP07858 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.57■□□□□ 0.88
CTSBP07858 AC092437.1-201ENST00000624794 1048 ntBASIC20.57■□□□□ 0.88
CTSBP07858 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.57■□□□□ 0.88
CTSBP07858 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.57■□□□□ 0.88
CTSBP07858 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSBP07858 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CTSBP07858 AC139530.1-201ENST00000575312 1977 ntBASIC20.57■□□□□ 0.88
CTSBP07858 AC080038.3-201ENST00000623346 1952 ntBASIC20.57■□□□□ 0.88
CTSBP07858 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CTSBP07858 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.56■□□□□ 0.88
CTSBP07858 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CTSBP07858 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CTSBP07858 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CTSBP07858 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
CTSBP07858 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CTSBP07858 OR7E47P-201ENST00000546390 1422 ntBASIC20.55■□□□□ 0.88
CTSBP07858 AC004854.2-201ENST00000608450 1441 ntBASIC20.55■□□□□ 0.88
CTSBP07858 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.55■□□□□ 0.88
CTSBP07858 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.55■□□□□ 0.88
CTSBP07858 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTSBP07858 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CTSBP07858 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTSBP07858 AC005224.4-201ENST00000583262 1652 ntBASIC20.54■□□□□ 0.88
CTSBP07858 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.54■□□□□ 0.88
CTSBP07858 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CTSBP07858 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.54■□□□□ 0.88
CTSBP07858 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.54■□□□□ 0.88
CTSBP07858 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 AP004607.4-201ENST00000530158 1459 ntBASIC20.54■□□□□ 0.88
CTSBP07858 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 AP004607.7-201ENST00000527152 1677 ntBASIC20.54■□□□□ 0.88
CTSBP07858 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CTSBP07858 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTSBP07858 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSBP07858 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.53■□□□□ 0.88
CTSBP07858 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.53■□□□□ 0.88
CTSBP07858 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CTSBP07858 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.53■□□□□ 0.88
CTSBP07858 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.53■□□□□ 0.88
CTSBP07858 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.53■□□□□ 0.88
CTSBP07858 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSBP07858 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTSBP07858 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSBP07858 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSBP07858 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CTSBP07858 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTSBP07858 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSBP07858 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.52■□□□□ 0.88
CTSBP07858 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTSBP07858 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms