Protein–RNA interactions for Protein: P05388

RPLP0, 60S acidic ribosomal protein P0, humanhuman

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPLP0P05388 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPLP0P05388 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.13■□□□□ 0.97
RPLP0P05388 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RPLP0P05388 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPLP0P05388 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPLP0P05388 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPLP0P05388 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.13■□□□□ 0.97
RPLP0P05388 AC016769.1-201ENST00000409132 1010 ntBASIC21.13■□□□□ 0.97
RPLP0P05388 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPLP0P05388 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RPLP0P05388 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.13■□□□□ 0.97
RPLP0P05388 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPLP0P05388 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RPLP0P05388 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPLP0P05388 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPLP0P05388 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPLP0P05388 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RPLP0P05388 ID1-201ENST00000376105 1233 ntBASIC21.12■□□□□ 0.97
RPLP0P05388 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.12■□□□□ 0.97
RPLP0P05388 SMUG1P1-201ENST00000590640 811 ntBASIC21.12■□□□□ 0.97
RPLP0P05388 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPLP0P05388 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPLP0P05388 C9orf163-202ENST00000624034 2573 ntBASIC21.12■□□□□ 0.97
RPLP0P05388 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RPLP0P05388 AL117328.2-201ENST00000624617 1940 ntBASIC21.12■□□□□ 0.97
RPLP0P05388 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPLP0P05388 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.11■□□□□ 0.97
RPLP0P05388 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.11■□□□□ 0.97
RPLP0P05388 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RPLP0P05388 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPLP0P05388 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPLP0P05388 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPLP0P05388 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPLP0P05388 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPLP0P05388 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPLP0P05388 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
RPLP0P05388 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RPLP0P05388 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.1■□□□□ 0.97
RPLP0P05388 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.1■□□□□ 0.97
RPLP0P05388 AC004854.2-201ENST00000608450 1441 ntBASIC21.1■□□□□ 0.97
RPLP0P05388 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RPLP0P05388 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.09■□□□□ 0.97
RPLP0P05388 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RPLP0P05388 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPLP0P05388 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RPLP0P05388 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPLP0P05388 AC006015.1-201ENST00000429970 570 ntBASIC21.09■□□□□ 0.97
RPLP0P05388 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.09■□□□□ 0.97
RPLP0P05388 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.09■□□□□ 0.97
RPLP0P05388 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.09■□□□□ 0.97
RPLP0P05388 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPLP0P05388 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPLP0P05388 AC080038.1-201ENST00000611274 1154 ntBASIC21.09■□□□□ 0.97
RPLP0P05388 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPLP0P05388 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPLP0P05388 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPLP0P05388 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPLP0P05388 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.09■□□□□ 0.97
RPLP0P05388 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPLP0P05388 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.09■□□□□ 0.97
RPLP0P05388 AP004607.4-201ENST00000530158 1459 ntBASIC21.08■□□□□ 0.97
RPLP0P05388 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RPLP0P05388 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPLP0P05388 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPLP0P05388 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPLP0P05388 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPLP0P05388 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPLP0P05388 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.08■□□□□ 0.97
RPLP0P05388 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.08■□□□□ 0.97
RPLP0P05388 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.08■□□□□ 0.97
RPLP0P05388 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPLP0P05388 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPLP0P05388 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.08■□□□□ 0.97
RPLP0P05388 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.08■□□□□ 0.97
RPLP0P05388 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
RPLP0P05388 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPLP0P05388 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPLP0P05388 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPLP0P05388 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPLP0P05388 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPLP0P05388 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPLP0P05388 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPLP0P05388 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.07■□□□□ 0.96
RPLP0P05388 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.07■□□□□ 0.96
RPLP0P05388 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPLP0P05388 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
RPLP0P05388 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.07■□□□□ 0.96
RPLP0P05388 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPLP0P05388 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPLP0P05388 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms