Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND4P03905 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND4P03905 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND4P03905 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
MT-ND4P03905 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND4P03905 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.73■□□□□ 0.59
MT-ND4P03905 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MT-ND4P03905 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.72■□□□□ 0.59
MT-ND4P03905 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND4P03905 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND4P03905 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND4P03905 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.72■□□□□ 0.59
MT-ND4P03905 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.72■□□□□ 0.59
MT-ND4P03905 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND4P03905 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND4P03905 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.72■□□□□ 0.59
MT-ND4P03905 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
MT-ND4P03905 AC244015.2-201ENST00000616358 1861 ntBASIC18.71■□□□□ 0.59
MT-ND4P03905 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MT-ND4P03905 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND4P03905 AC021242.3-201ENST00000607598 1377 ntBASIC18.71■□□□□ 0.59
MT-ND4P03905 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND4P03905 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND4P03905 LINC01521-201ENST00000504184 1943 ntBASIC18.71■□□□□ 0.59
MT-ND4P03905 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND4P03905 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND4P03905 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND4P03905 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MT-ND4P03905 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND4P03905 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND4P03905 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MT-ND4P03905 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND4P03905 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND4P03905 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MT-ND4P03905 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MT-ND4P03905 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND4P03905 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND4P03905 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND4P03905 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND4P03905 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MT-ND4P03905 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.7■□□□□ 0.58
MT-ND4P03905 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND4P03905 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
MT-ND4P03905 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND4P03905 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND4P03905 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 BX664725.1-201ENST00000438252 379 ntBASIC18.69■□□□□ 0.58
MT-ND4P03905 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND4P03905 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND4P03905 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.69■□□□□ 0.58
MT-ND4P03905 MIR6722-201ENST00000617286 78 ntBASIC18.69■□□□□ 0.58
MT-ND4P03905 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.69■□□□□ 0.58
MT-ND4P03905 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.69■□□□□ 0.58
MT-ND4P03905 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MT-ND4P03905 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND4P03905 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 AF106564.1-201ENST00000607058 2553 ntBASIC18.69■□□□□ 0.58
MT-ND4P03905 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND4P03905 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MT-ND4P03905 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.68■□□□□ 0.58
MT-ND4P03905 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-ND4P03905 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MT-ND4P03905 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.68■□□□□ 0.58
MT-ND4P03905 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MT-ND4P03905 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.68■□□□□ 0.58
MT-ND4P03905 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.68■□□□□ 0.58
MT-ND4P03905 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-ND4P03905 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
MT-ND4P03905 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
MT-ND4P03905 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND4P03905 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND4P03905 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MT-ND4P03905 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.67■□□□□ 0.58
MT-ND4P03905 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-ND4P03905 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms