Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 Z98882.1-201ENST00000622160 2253 ntBASIC20.32■□□□□ 0.84
MT-ND1P03886 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 MIR6722-201ENST00000617286 78 ntBASIC20.32■□□□□ 0.84
MT-ND1P03886 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
MT-ND1P03886 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.31■□□□□ 0.84
MT-ND1P03886 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.31■□□□□ 0.84
MT-ND1P03886 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.31■□□□□ 0.84
MT-ND1P03886 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.31■□□□□ 0.84
MT-ND1P03886 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MT-ND1P03886 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
MT-ND1P03886 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.3■□□□□ 0.84
MT-ND1P03886 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MT-ND1P03886 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
MT-ND1P03886 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MT-ND1P03886 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.3■□□□□ 0.84
MT-ND1P03886 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 AC004687.1-201ENST00000579003 1625 ntBASIC20.3■□□□□ 0.84
MT-ND1P03886 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MT-ND1P03886 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 AC005703.6-201ENST00000623265 1329 ntBASIC20.29■□□□□ 0.84
MT-ND1P03886 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MT-ND1P03886 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
MT-ND1P03886 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MT-ND1P03886 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.29■□□□□ 0.84
MT-ND1P03886 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MT-ND1P03886 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND1P03886 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND1P03886 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.28■□□□□ 0.84
MT-ND1P03886 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
MT-ND1P03886 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
MT-ND1P03886 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.28■□□□□ 0.84
MT-ND1P03886 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
MT-ND1P03886 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND1P03886 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.28■□□□□ 0.84
MT-ND1P03886 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.28■□□□□ 0.84
MT-ND1P03886 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MT-ND1P03886 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MT-ND1P03886 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MT-ND1P03886 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-ND1P03886 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND1P03886 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.27■□□□□ 0.84
MT-ND1P03886 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
MT-ND1P03886 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND1P03886 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
MT-ND1P03886 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND1P03886 FEM1AP4-201ENST00000443167 1987 ntBASIC20.27■□□□□ 0.84
MT-ND1P03886 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND1P03886 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-ND1P03886 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MT-ND1P03886 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.27■□□□□ 0.84
MT-ND1P03886 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.27■□□□□ 0.84
MT-ND1P03886 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MT-ND1P03886 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.27■□□□□ 0.83
MT-ND1P03886 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.27■□□□□ 0.83
MT-ND1P03886 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
MT-ND1P03886 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND1P03886 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MT-ND1P03886 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms