Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT6AP02538 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT6AP02538 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT6AP02538 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT6AP02538 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT6AP02538 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT6AP02538 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT6AP02538 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT6AP02538 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
KRT6AP02538 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT6AP02538 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KRT6AP02538 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT6AP02538 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT6AP02538 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT6AP02538 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KRT6AP02538 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT6AP02538 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT6AP02538 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT6AP02538 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT6AP02538 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT6AP02538 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT6AP02538 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
KRT6AP02538 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.89■□□□□ 0.94
KRT6AP02538 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.89■□□□□ 0.93
KRT6AP02538 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
KRT6AP02538 DUX4L19-201ENST00000557448 1267 ntBASIC20.89■□□□□ 0.93
KRT6AP02538 AC087239.1-201ENST00000622671 572 ntBASIC20.89■□□□□ 0.93
KRT6AP02538 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
KRT6AP02538 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
KRT6AP02538 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT6AP02538 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT6AP02538 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT6AP02538 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.88■□□□□ 0.93
KRT6AP02538 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
KRT6AP02538 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 AC010542.4-201ENST00000563151 1910 ntBASIC20.88■□□□□ 0.93
KRT6AP02538 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 AL024507.2-201ENST00000606070 2574 ntBASIC20.88■□□□□ 0.93
KRT6AP02538 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KRT6AP02538 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT6AP02538 FAM99A-202ENST00000538190 1989 ntBASIC20.87■□□□□ 0.93
KRT6AP02538 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.87■□□□□ 0.93
KRT6AP02538 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.87■□□□□ 0.93
KRT6AP02538 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT6AP02538 AL138724.1-201ENST00000606771 1088 ntBASIC20.87■□□□□ 0.93
KRT6AP02538 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.87■□□□□ 0.93
KRT6AP02538 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KRT6AP02538 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.87■□□□□ 0.93
KRT6AP02538 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KRT6AP02538 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
KRT6AP02538 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
KRT6AP02538 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT6AP02538 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT6AP02538 SYT6-210ENST00000641643 1587 ntBASIC20.86■□□□□ 0.93
KRT6AP02538 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.86■□□□□ 0.93
KRT6AP02538 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.86■□□□□ 0.93
KRT6AP02538 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.86■□□□□ 0.93
KRT6AP02538 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
KRT6AP02538 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KRT6AP02538 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.86■□□□□ 0.93
KRT6AP02538 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 OR7E47P-201ENST00000546390 1422 ntBASIC20.86■□□□□ 0.93
KRT6AP02538 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KRT6AP02538 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
KRT6AP02538 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.85■□□□□ 0.93
KRT6AP02538 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KRT6AP02538 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.85■□□□□ 0.93
KRT6AP02538 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KRT6AP02538 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms