Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HLA-DQB1P01920 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 HSD17B1P1-201ENST00000590052 955 ntBASIC18.67■□□□□ 0.58
HLA-DQB1P01920 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HLA-DQB1P01920 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DQB1P01920 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DQB1P01920 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQB1P01920 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQB1P01920 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DQB1P01920 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 LINC01529-204ENST00000636474 1715 ntBASIC18.64■□□□□ 0.57
HLA-DQB1P01920 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 AC139795.1-202ENST00000500444 432 ntBASIC18.64■□□□□ 0.57
HLA-DQB1P01920 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DQB1P01920 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 AC120024.1-201ENST00000562672 995 ntBASIC18.63■□□□□ 0.57
HLA-DQB1P01920 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DQB1P01920 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB1P01920 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DQB1P01920 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms