Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.71■□□□□ 0.59
CCNKO75909 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.71■□□□□ 0.59
CCNKO75909 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.71■□□□□ 0.59
CCNKO75909 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CCNKO75909 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCNKO75909 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNKO75909 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNKO75909 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNKO75909 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNKO75909 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNKO75909 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNKO75909 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNKO75909 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.7■□□□□ 0.58
CCNKO75909 AC026471.1-201ENST00000564629 3026 ntBASIC18.7■□□□□ 0.58
CCNKO75909 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNKO75909 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.7■□□□□ 0.58
CCNKO75909 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCNKO75909 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CCNKO75909 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCNKO75909 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.69■□□□□ 0.58
CCNKO75909 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 AFG3L1P-217ENST00000557444 2447 ntBASIC18.69■□□□□ 0.58
CCNKO75909 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCNKO75909 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCNKO75909 Z98882.1-201ENST00000622160 2253 ntBASIC18.69■□□□□ 0.58
CCNKO75909 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCNKO75909 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCNKO75909 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCNKO75909 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.68■□□□□ 0.58
CCNKO75909 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.68■□□□□ 0.58
CCNKO75909 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCNKO75909 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNKO75909 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CCNKO75909 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.67■□□□□ 0.58
CCNKO75909 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 AC087742.1-201ENST00000575880 1738 ntBASIC18.67■□□□□ 0.58
CCNKO75909 AC138932.1-201ENST00000534164 6830 ntBASIC18.67■□□□□ 0.58
CCNKO75909 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CCNKO75909 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCNKO75909 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCNKO75909 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCNKO75909 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNKO75909 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.66■□□□□ 0.58
CCNKO75909 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNKO75909 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNKO75909 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNKO75909 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNKO75909 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.66■□□□□ 0.58
CCNKO75909 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCNKO75909 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCNKO75909 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCNKO75909 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCNKO75909 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms