Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDX4O14627 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDX4O14627 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDX4O14627 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDX4O14627 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDX4O14627 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CDX4O14627 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDX4O14627 CYP2T1P-201ENST00000432607 1285 ntBASIC21.09■□□□□ 0.97
CDX4O14627 TERF1P5-201ENST00000477545 1207 ntBASIC21.09■□□□□ 0.97
CDX4O14627 RARRES2P4-201ENST00000514074 484 ntBASIC21.09■□□□□ 0.97
CDX4O14627 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.09■□□□□ 0.97
CDX4O14627 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.09■□□□□ 0.97
CDX4O14627 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.09■□□□□ 0.97
CDX4O14627 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.09■□□□□ 0.97
CDX4O14627 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.09■□□□□ 0.97
CDX4O14627 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDX4O14627 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDX4O14627 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDX4O14627 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDX4O14627 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.08■□□□□ 0.97
CDX4O14627 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDX4O14627 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.08■□□□□ 0.97
CDX4O14627 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDX4O14627 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.08■□□□□ 0.97
CDX4O14627 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.08■□□□□ 0.97
CDX4O14627 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.08■□□□□ 0.97
CDX4O14627 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.07■□□□□ 0.96
CDX4O14627 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDX4O14627 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 DUSP8P5-201ENST00000422884 1815 ntBASIC21.07■□□□□ 0.96
CDX4O14627 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.07■□□□□ 0.96
CDX4O14627 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 AL596275.1-201ENST00000423464 877 ntBASIC21.07■□□□□ 0.96
CDX4O14627 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.07■□□□□ 0.96
CDX4O14627 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.07■□□□□ 0.96
CDX4O14627 AC092118.2-201ENST00000613495 667 ntBASIC21.07■□□□□ 0.96
CDX4O14627 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDX4O14627 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDX4O14627 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDX4O14627 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDX4O14627 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.06■□□□□ 0.96
CDX4O14627 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDX4O14627 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDX4O14627 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.06■□□□□ 0.96
CDX4O14627 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDX4O14627 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDX4O14627 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDX4O14627 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDX4O14627 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDX4O14627 ESRRAP1-201ENST00000400596 1257 ntBASIC21.05■□□□□ 0.96
CDX4O14627 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.05■□□□□ 0.96
CDX4O14627 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDX4O14627 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.05■□□□□ 0.96
CDX4O14627 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.05■□□□□ 0.96
CDX4O14627 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDX4O14627 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.05■□□□□ 0.96
CDX4O14627 AC083880.1-201ENST00000608266 535 ntBASIC21.05■□□□□ 0.96
CDX4O14627 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDX4O14627 OR10C1-204ENST00000622521 1039 ntBASIC21.05■□□□□ 0.96
CDX4O14627 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.05■□□□□ 0.96
CDX4O14627 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.05■□□□□ 0.96
CDX4O14627 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDX4O14627 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDX4O14627 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDX4O14627 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CDX4O14627 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CDX4O14627 AC138932.3-201ENST00000567634 1902 ntBASIC21.04■□□□□ 0.96
CDX4O14627 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDX4O14627 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.04■□□□□ 0.96
CDX4O14627 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.04■□□□□ 0.96
CDX4O14627 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.04■□□□□ 0.96
CDX4O14627 AL512625.2-201ENST00000417533 625 ntBASIC21.04■□□□□ 0.96
CDX4O14627 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CDX4O14627 AC093787.1-201ENST00000450396 207 ntBASIC21.04■□□□□ 0.96
CDX4O14627 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.04■□□□□ 0.96
CDX4O14627 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.04■□□□□ 0.96
CDX4O14627 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.04■□□□□ 0.96
CDX4O14627 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.04■□□□□ 0.96
CDX4O14627 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CDX4O14627 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.04■□□□□ 0.96
CDX4O14627 LINC00543-201ENST00000567234 1845 ntBASIC21.04■□□□□ 0.96
CDX4O14627 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDX4O14627 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDX4O14627 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDX4O14627 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.03■□□□□ 0.96
CDX4O14627 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.03■□□□□ 0.96
CDX4O14627 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDX4O14627 AC007322.4-201ENST00000509611 723 ntBASIC21.03■□□□□ 0.96
CDX4O14627 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDX4O14627 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.03■□□□□ 0.96
CDX4O14627 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms