Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.58■■□□□ 1.05
COPEO14579 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
COPEO14579 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.58■■□□□ 1.04
COPEO14579 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COPEO14579 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.57■■□□□ 1.04
COPEO14579 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
COPEO14579 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COPEO14579 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COPEO14579 SLC25A24-204ENST00000569674 2357 ntBASIC21.57■■□□□ 1.04
COPEO14579 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.57■■□□□ 1.04
COPEO14579 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COPEO14579 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COPEO14579 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.57■■□□□ 1.04
COPEO14579 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.57■■□□□ 1.04
COPEO14579 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.57■■□□□ 1.04
COPEO14579 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COPEO14579 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COPEO14579 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
COPEO14579 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
COPEO14579 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.56■■□□□ 1.04
COPEO14579 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COPEO14579 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
COPEO14579 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.56■■□□□ 1.04
COPEO14579 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.56■■□□□ 1.04
COPEO14579 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COPEO14579 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
COPEO14579 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.55■■□□□ 1.04
COPEO14579 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.55■■□□□ 1.04
COPEO14579 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
COPEO14579 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.55■■□□□ 1.04
COPEO14579 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.55■■□□□ 1.04
COPEO14579 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COPEO14579 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
COPEO14579 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COPEO14579 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COPEO14579 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COPEO14579 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.54■■□□□ 1.04
COPEO14579 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.54■■□□□ 1.04
COPEO14579 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COPEO14579 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.53■■□□□ 1.04
COPEO14579 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COPEO14579 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPEO14579 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPEO14579 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.53■■□□□ 1.04
COPEO14579 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
COPEO14579 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COPEO14579 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
COPEO14579 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.53■■□□□ 1.04
COPEO14579 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.53■■□□□ 1.04
COPEO14579 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.53■■□□□ 1.04
COPEO14579 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPEO14579 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.53■■□□□ 1.04
COPEO14579 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COPEO14579 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COPEO14579 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPEO14579 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.52■■□□□ 1.04
COPEO14579 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
COPEO14579 C17orf82-201ENST00000623772 1530 ntBASIC21.52■■□□□ 1.04
COPEO14579 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
COPEO14579 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.52■■□□□ 1.04
COPEO14579 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPEO14579 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COPEO14579 FEM1AP4-201ENST00000443167 1987 ntBASIC21.52■■□□□ 1.04
COPEO14579 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COPEO14579 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COPEO14579 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
COPEO14579 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.52■■□□□ 1.03
COPEO14579 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COPEO14579 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.51■■□□□ 1.03
COPEO14579 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.51■■□□□ 1.03
COPEO14579 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.51■■□□□ 1.03
COPEO14579 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.51■■□□□ 1.03
COPEO14579 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 AC092028.1-203ENST00000608262 953 ntBASIC21.51■■□□□ 1.03
COPEO14579 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COPEO14579 AF106564.1-201ENST00000607058 2553 ntBASIC21.51■■□□□ 1.03
COPEO14579 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms