Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 AC012313.1-201ENST00000593393 3059 ntBASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 AFG3L1P-217ENST00000557444 2447 ntBASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCP4L1A6NKN8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 NEFHP1-201ENST00000412845 2629 ntBASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCP4L1A6NKN8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 AC008894.3-201ENST00000624324 3103 ntBASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
PCP4L1A6NKN8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 AC018358.1-201ENST00000631079 1402 ntBASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCP4L1A6NKN8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCP4L1A6NKN8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 PCDHAC2-203ENST00000615316 3011 ntBASIC17.02■□□□□ 0.31
PCP4L1A6NKN8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCP4L1A6NKN8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 PKD1P1-201ENST00000458669 6805 ntBASIC17■□□□□ 0.31
PCP4L1A6NKN8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 AC010864.1-201ENST00000609407 1511 ntBASIC17■□□□□ 0.31
PCP4L1A6NKN8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms