Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 RARRES2P2-201ENST00000394842 485 ntBASIC18.87■□□□□ 0.61
SHISA3A0PJX4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SHISA3A0PJX4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SHISA3A0PJX4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.85■□□□□ 0.61
SHISA3A0PJX4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.85■□□□□ 0.61
SHISA3A0PJX4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 FEM1AP1-201ENST00000431297 1995 ntBASIC18.84■□□□□ 0.61
SHISA3A0PJX4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SHISA3A0PJX4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHISA3A0PJX4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SHISA3A0PJX4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SHISA3A0PJX4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.83■□□□□ 0.6
SHISA3A0PJX4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SHISA3A0PJX4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 RNF165-205ENST00000588679 2904 ntBASIC18.81■□□□□ 0.6
SHISA3A0PJX4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SHISA3A0PJX4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA3A0PJX4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms