Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.83■■■□□ 2.05
LOC102724428A0A0B4J2F2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.83■■■□□ 2.04
LOC102724428A0A0B4J2F2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 AC138907.5-202ENST00000569484 235 ntBASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
LOC102724428A0A0B4J2F2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 KRT18P20-201ENST00000548986 1279 ntBASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 AC008687.6-201ENST00000596318 630 ntBASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LOC102724428A0A0B4J2F2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
LOC102724428A0A0B4J2F2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
LOC102724428A0A0B4J2F2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
LOC102724428A0A0B4J2F2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.79■■■□□ 2.04
LOC102724428A0A0B4J2F2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.79■■■□□ 2.04
LOC102724428A0A0B4J2F2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.79■■■□□ 2.04
LOC102724428A0A0B4J2F2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
LOC102724428A0A0B4J2F2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
LOC102724428A0A0B4J2F2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 AC093827.2-201ENST00000512654 315 ntBASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.77■■■□□ 2.04
LOC102724428A0A0B4J2F2 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.76■■■□□ 2.04
LOC102724428A0A0B4J2F2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.04
LOC102724428A0A0B4J2F2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.76■■■□□ 2.04
LOC102724428A0A0B4J2F2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
LOC102724428A0A0B4J2F2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
LOC102724428A0A0B4J2F2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
LOC102724428A0A0B4J2F2 POU5F1P3-201ENST00000428824 1078 ntBASIC27.76■■■□□ 2.03
LOC102724428A0A0B4J2F2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC27.76■■■□□ 2.03
LOC102724428A0A0B4J2F2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.76■■■□□ 2.03
LOC102724428A0A0B4J2F2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
LOC102724428A0A0B4J2F2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.75■■■□□ 2.03
LOC102724428A0A0B4J2F2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.75■■■□□ 2.03
LOC102724428A0A0B4J2F2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
LOC102724428A0A0B4J2F2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
LOC102724428A0A0B4J2F2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
LOC102724428A0A0B4J2F2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 MIR4758-201ENST00000577688 71 ntBASIC27.74■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms