Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV26-1A0A087WT03 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV26-1A0A087WT03 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV26-1A0A087WT03 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV26-1A0A087WT03 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 EDA-201ENST00000338901 1233 ntBASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRAV26-1A0A087WT03 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 MIR638-201ENST00000385237 100 ntBASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 AC133561.4-201ENST00000566112 224 ntBASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 AL355001.2-201ENST00000620617 1191 ntBASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRAV26-1A0A087WT03 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.48■□□□□ 0.07
TRAV26-1A0A087WT03 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms