Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
R3HDM4Q96D70 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3HDM4Q96D70 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
R3HDM4Q96D70 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.25■■□□□ 1.15
R3HDM4Q96D70 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
R3HDM4Q96D70 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3HDM4Q96D70 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.23■■□□□ 1.15
R3HDM4Q96D70 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3HDM4Q96D70 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.22■■□□□ 1.15
R3HDM4Q96D70 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.21■■□□□ 1.15
R3HDM4Q96D70 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.2■■□□□ 1.14
R3HDM4Q96D70 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC22.2■■□□□ 1.14
R3HDM4Q96D70 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
R3HDM4Q96D70 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.19■■□□□ 1.14
R3HDM4Q96D70 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.19■■□□□ 1.14
R3HDM4Q96D70 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.19■■□□□ 1.14
R3HDM4Q96D70 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM4Q96D70 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM4Q96D70 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM4Q96D70 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.18■■□□□ 1.14
R3HDM4Q96D70 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM4Q96D70 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM4Q96D70 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.17■■□□□ 1.14
R3HDM4Q96D70 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM4Q96D70 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM4Q96D70 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM4Q96D70 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.16■■□□□ 1.14
R3HDM4Q96D70 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM4Q96D70 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM4Q96D70 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
R3HDM4Q96D70 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
R3HDM4Q96D70 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
R3HDM4Q96D70 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC22.14■■□□□ 1.13
R3HDM4Q96D70 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3HDM4Q96D70 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.13■■□□□ 1.13
R3HDM4Q96D70 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM4Q96D70 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3HDM4Q96D70 AC097358.2-201ENST00000607541 1159 ntBASIC22.1■■□□□ 1.13
R3HDM4Q96D70 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM4Q96D70 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3HDM4Q96D70 ABCB10P1-201ENST00000614297 2181 ntBASIC22.09■■□□□ 1.13
R3HDM4Q96D70 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.08■■□□□ 1.13
R3HDM4Q96D70 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC22.08■■□□□ 1.13
R3HDM4Q96D70 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.07■■□□□ 1.12
R3HDM4Q96D70 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.07■■□□□ 1.12
R3HDM4Q96D70 SETD8P1-201ENST00000623146 1180 ntBASIC22.07■■□□□ 1.12
R3HDM4Q96D70 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
R3HDM4Q96D70 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3HDM4Q96D70 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3HDM4Q96D70 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
R3HDM4Q96D70 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
R3HDM4Q96D70 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.05■■□□□ 1.12
R3HDM4Q96D70 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.05■■□□□ 1.12
R3HDM4Q96D70 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
R3HDM4Q96D70 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HDM4Q96D70 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3HDM4Q96D70 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
R3HDM4Q96D70 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22■■□□□ 1.11
R3HDM4Q96D70 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3HDM4Q96D70 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
R3HDM4Q96D70 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3HDM4Q96D70 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.98■■□□□ 1.11
R3HDM4Q96D70 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HDM4Q96D70 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HDM4Q96D70 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3HDM4Q96D70 AC136428.2-201ENST00000563187 214 ntBASIC21.95■■□□□ 1.1
R3HDM4Q96D70 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3HDM4Q96D70 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HDM4Q96D70 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HDM4Q96D70 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
R3HDM4Q96D70 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HDM4Q96D70 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
R3HDM4Q96D70 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
R3HDM4Q96D70 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
R3HDM4Q96D70 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.92■■□□□ 1.1
R3HDM4Q96D70 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
R3HDM4Q96D70 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
R3HDM4Q96D70 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.92■■□□□ 1.1
R3HDM4Q96D70 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
R3HDM4Q96D70 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
R3HDM4Q96D70 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
R3HDM4Q96D70 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HDM4Q96D70 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HDM4Q96D70 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
R3HDM4Q96D70 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
R3HDM4Q96D70 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.89■■□□□ 1.09
R3HDM4Q96D70 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.89■■□□□ 1.09
R3HDM4Q96D70 ABCB10P3-201ENST00000561950 2166 ntBASIC21.88■■□□□ 1.09
R3HDM4Q96D70 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
R3HDM4Q96D70 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
R3HDM4Q96D70 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
R3HDM4Q96D70 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
R3HDM4Q96D70 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
R3HDM4Q96D70 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
R3HDM4Q96D70 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
R3HDM4Q96D70 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.85■■□□□ 1.09
R3HDM4Q96D70 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms