Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CHCHD1Q96BP2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
CHCHD1Q96BP2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHCHD1Q96BP2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
CHCHD1Q96BP2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHCHD1Q96BP2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.95■□□□□ 0.78
CHCHD1Q96BP2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHCHD1Q96BP2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHCHD1Q96BP2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHCHD1Q96BP2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHCHD1Q96BP2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHCHD1Q96BP2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHCHD1Q96BP2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHCHD1Q96BP2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHCHD1Q96BP2 AC120057.4-201ENST00000624722 1615 ntBASIC19.91■□□□□ 0.78
CHCHD1Q96BP2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHCHD1Q96BP2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHCHD1Q96BP2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHCHD1Q96BP2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHCHD1Q96BP2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHCHD1Q96BP2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC19.88■□□□□ 0.77
CHCHD1Q96BP2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.88■□□□□ 0.77
CHCHD1Q96BP2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHCHD1Q96BP2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHCHD1Q96BP2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHCHD1Q96BP2 AC142086.6-201ENST00000621154 1765 ntBASIC19.84■□□□□ 0.77
CHCHD1Q96BP2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHCHD1Q96BP2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.84■□□□□ 0.77
CHCHD1Q96BP2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD1Q96BP2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
CHCHD1Q96BP2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD1Q96BP2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD1Q96BP2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD1Q96BP2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHCHD1Q96BP2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHCHD1Q96BP2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD1Q96BP2 AC135731.1-201ENST00000569415 2548 ntBASIC19.78■□□□□ 0.76
CHCHD1Q96BP2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.78■□□□□ 0.76
CHCHD1Q96BP2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.77■□□□□ 0.76
CHCHD1Q96BP2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHCHD1Q96BP2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.75■□□□□ 0.75
CHCHD1Q96BP2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD1Q96BP2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHCHD1Q96BP2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHCHD1Q96BP2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHCHD1Q96BP2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD1Q96BP2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHCHD1Q96BP2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHCHD1Q96BP2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHCHD1Q96BP2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.7■□□□□ 0.74
CHCHD1Q96BP2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHCHD1Q96BP2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHCHD1Q96BP2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHCHD1Q96BP2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHCHD1Q96BP2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHCHD1Q96BP2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 ST7-AS1-201ENST00000456775 1889 ntBASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHCHD1Q96BP2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CHCHD1Q96BP2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CHCHD1Q96BP2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.62■□□□□ 0.73
CHCHD1Q96BP2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD1Q96BP2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CHCHD1Q96BP2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHCHD1Q96BP2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHCHD1Q96BP2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms