Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC11.82□□□□□ -0.52
SYNE2Q8WXH0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SYNE2Q8WXH0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SYNE2Q8WXH0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SYNE2Q8WXH0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SYNE2Q8WXH0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC11.79□□□□□ -0.52
SYNE2Q8WXH0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SYNE2Q8WXH0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SYNE2Q8WXH0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC11.79□□□□□ -0.52
SYNE2Q8WXH0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SYNE2Q8WXH0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SYNE2Q8WXH0 AC021231.2-201ENST00000594613 730 ntBASIC11.77□□□□□ -0.53
SYNE2Q8WXH0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
SYNE2Q8WXH0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SYNE2Q8WXH0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC11.75□□□□□ -0.53
SYNE2Q8WXH0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC11.75□□□□□ -0.53
SYNE2Q8WXH0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SYNE2Q8WXH0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SYNE2Q8WXH0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SYNE2Q8WXH0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SYNE2Q8WXH0 AC012354.3-201ENST00000623734 483 ntBASIC11.74□□□□□ -0.53
SYNE2Q8WXH0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC11.74□□□□□ -0.53
SYNE2Q8WXH0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SYNE2Q8WXH0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
SYNE2Q8WXH0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SYNE2Q8WXH0 AL033527.3-201ENST00000566366 1196 ntBASIC11.73□□□□□ -0.53
SYNE2Q8WXH0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SYNE2Q8WXH0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC11.71□□□□□ -0.54
SYNE2Q8WXH0 RNF126P1-201ENST00000567452 1320 ntBASIC11.7□□□□□ -0.54
SYNE2Q8WXH0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC11.7□□□□□ -0.54
SYNE2Q8WXH0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SYNE2Q8WXH0 AL133380.1-201ENST00000506013 324 ntBASIC11.7□□□□□ -0.54
SYNE2Q8WXH0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC11.7□□□□□ -0.54
SYNE2Q8WXH0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
SYNE2Q8WXH0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SYNE2Q8WXH0 DUX4L29-201ENST00000425409 679 ntBASIC11.68□□□□□ -0.54
SYNE2Q8WXH0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SYNE2Q8WXH0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SYNE2Q8WXH0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SYNE2Q8WXH0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SYNE2Q8WXH0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC11.66□□□□□ -0.54
SYNE2Q8WXH0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC11.65□□□□□ -0.54
SYNE2Q8WXH0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
SYNE2Q8WXH0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SYNE2Q8WXH0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SYNE2Q8WXH0 AL035685.1-201ENST00000636663 812 ntBASIC11.64□□□□□ -0.55
SYNE2Q8WXH0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SYNE2Q8WXH0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SYNE2Q8WXH0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
SYNE2Q8WXH0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC11.63□□□□□ -0.55
SYNE2Q8WXH0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYNE2Q8WXH0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYNE2Q8WXH0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYNE2Q8WXH0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYNE2Q8WXH0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYNE2Q8WXH0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYNE2Q8WXH0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC11.61□□□□□ -0.55
SYNE2Q8WXH0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC11.61□□□□□ -0.55
SYNE2Q8WXH0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC11.61□□□□□ -0.55
SYNE2Q8WXH0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC11.6□□□□□ -0.55
SYNE2Q8WXH0 RARRES2P1-201ENST00000474487 481 ntBASIC11.6□□□□□ -0.55
SYNE2Q8WXH0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SYNE2Q8WXH0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 DUX4L11-201ENST00000611504 1267 ntBASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 DUX4L12-201ENST00000614593 1267 ntBASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 DUX4L14-201ENST00000621227 1267 ntBASIC11.59□□□□□ -0.55
SYNE2Q8WXH0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC11.58□□□□□ -0.56
SYNE2Q8WXH0 AC008813.1-201ENST00000536597 885 ntBASIC11.58□□□□□ -0.56
SYNE2Q8WXH0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
SYNE2Q8WXH0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SYNE2Q8WXH0 NTF6A-201ENST00000591175 560 ntBASIC11.58□□□□□ -0.56
SYNE2Q8WXH0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SYNE2Q8WXH0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SYNE2Q8WXH0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC11.55□□□□□ -0.56
SYNE2Q8WXH0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC11.55□□□□□ -0.56
SYNE2Q8WXH0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SYNE2Q8WXH0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SYNE2Q8WXH0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SYNE2Q8WXH0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SYNE2Q8WXH0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SYNE2Q8WXH0 AL451085.2-201ENST00000605085 799 ntBASIC11.53□□□□□ -0.56
SYNE2Q8WXH0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC11.53□□□□□ -0.56
SYNE2Q8WXH0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC11.53□□□□□ -0.56
SYNE2Q8WXH0 AC092666.2-201ENST00000613287 246 ntBASIC11.53□□□□□ -0.56
SYNE2Q8WXH0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SYNE2Q8WXH0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SYNE2Q8WXH0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
SYNE2Q8WXH0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms